RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 VSTM2AQ8TAG5 236 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
CHRNE-201ENST00000293780 WNT10AQ9GZT5 417 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 WASHC3Q9Y3C0 194 aa13.54□□□□□ -0.24
CHRNE-201ENST00000293780 NDUFB3O43676 98 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 SUB1P53999 127 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHRNE-201ENST00000293780 NHLH1Q02575 133 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 SPATA45Q537H7 98 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 OR1B1Q8NGR6 318 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 OR4A5Q8NH83 315 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 TMEM186Q96B77 213 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 GRAMD2BQ96HH9 432 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 RPH3ALQ9UNE2 315 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 VWC2LB2RUY7 222 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 TNFRSF13BO14836 293 aaPredicted RBP13.53□□□□□ -0.24
CHRNE-201ENST00000293780 CTRLP40313 264 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 IGF2-ASQ6U949 168 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 FAM231DQ6ZW35 169 aa13.53□□□□□ -0.24
CHRNE-201ENST00000293780 H3BTX0 84 aa13.52□□□□□ -0.24
CHRNE-201ENST00000293780 MYCNOSP40205 109 aa13.52□□□□□ -0.24
CHRNE-201ENST00000293780 TNXAQ16473 311 aa13.52□□□□□ -0.24
CHRNE-201ENST00000293780 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.24
CHRNE-201ENST00000293780 CNTFRP26992 372 aa13.52□□□□□ -0.25
CHRNE-201ENST00000293780 LOXP28300 417 aaPredicted RBP13.52□□□□□ -0.25
CHRNE-201ENST00000293780 CAMPP49913 170 aa13.52□□□□□ -0.25
CHRNE-201ENST00000293780 PRRX1P54821 245 aa13.52□□□□□ -0.25
CHRNE-201ENST00000293780 LRRC10Q5BKY1 277 aa13.52□□□□□ -0.25
CHRNE-201ENST00000293780 ATOH7Q8N100 152 aa13.52□□□□□ -0.25
CHRNE-201ENST00000293780 C7orf69Q9H7B7 122 aa13.52□□□□□ -0.25
CHRNE-201ENST00000293780 TNFRSF19Q9NS68 423 aa13.52□□□□□ -0.25
CHRNE-201ENST00000293780 PGPA6NDG6 321 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 HIGD1CA8MV81 97 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 SLC25A5P05141 298 aaKnown RBP13.51□□□□□ -0.25
CHRNE-201ENST00000293780 DLX6P56179 175 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 LINC00311Q8N616 119 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 EPDR1Q9UM22 224 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 LINC00322Q6ZN03 302 aaPredicted RBP13.51□□□□□ -0.25
CHRNE-201ENST00000293780 ZNF596Q8TC21 504 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 WIPF2Q8TF74 440 aaPredicted RBP13.51□□□□□ -0.25
CHRNE-201ENST00000293780 GSX1Q9H4S2 264 aaPredicted RBP13.51□□□□□ -0.25
CHRNE-201ENST00000293780 PIEZO2Q9H5I5 2752 aa13.51□□□□□ -0.25
CHRNE-201ENST00000293780 ANKRD11Q6UB99 2663 aaPredicted RBP13.5□□□□□ -0.25
CHRNE-201ENST00000293780 IGLC7A0M8Q6 106 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 MAJINQ3KP22 176 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 VMA21Q3ZAQ7 101 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 LEMD1Q68G75 181 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 STPG4Q8N801 248 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 ZZEF1O43149 2961 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 UBE2G1P62253 170 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 TCF24Q7RTU0 167 aa13.5□□□□□ -0.25
CHRNE-201ENST00000293780 KLK10O43240 276 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 FAM87AP0C7U9 286 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 FAM71F2Q6NXP2 309 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 BORCS7Q96B45 105 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 CLEC7AQ9BXN2 247 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 UQCR10Q9UDW1 63 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 ACACAQ13085 2346 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 IGHV1-8P0DP01 117 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 CD24P25063 80 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 PERPQ96FX8 193 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 TXN2Q99757 166 aa13.49□□□□□ -0.25
CHRNE-201ENST00000293780 TACC2O95359 2948 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 NDUFB8O95169 186 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 NBEAP1P0C6P0 100 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 RASL11AQ6T310 242 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 MRPL27Q9P0M9 148 aaKnown RBP13.48□□□□□ -0.25
CHRNE-201ENST00000293780 CRYGCP07315 174 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 HIST1H1EP10412 219 aaKnown RBP13.48□□□□□ -0.25
CHRNE-201ENST00000293780 TMEM155Q4W5P6 130 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 Q6ZN92 141 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 C8orf31Q8N9H6 132 aa13.48□□□□□ -0.25
CHRNE-201ENST00000293780 ALKBH7Q9BT30 221 aaPredicted RBP13.48□□□□□ -0.25
CHRNE-201ENST00000293780 MALRD1Q5VYJ5 2156 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 C20orf202A1L168 122 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 HYPMO75409 117 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 IGLC2P0DOY2 106 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 IGLC3P0DOY3 106 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 ZNF137PP52743 207 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 RNASE6Q93091 150 aaKnown RBP13.47□□□□□ -0.25
CHRNE-201ENST00000293780 MC5RP33032 325 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 HNRNPA3P51991 378 aaKnown RBP13.47□□□□□ -0.25
CHRNE-201ENST00000293780 EBLN2Q6P2I7 272 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 OR2D3Q8NGH3 330 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 LAMTOR2Q9Y2Q5 125 aa13.47□□□□□ -0.25
CHRNE-201ENST00000293780 CSMD1Q96PZ7 3565 aa13.46□□□□□ -0.25
CHRNE-201ENST00000293780 PRRG2O14669 202 aa13.46□□□□□ -0.25
CHRNE-201ENST00000293780 HSBP1O75506 76 aa13.46□□□□□ -0.25
CHRNE-201ENST00000293780 RNASEKQ6P5S7 137 aaKnown RBP13.46□□□□□ -0.25
CHRNE-201ENST00000293780 MLST8Q9BVC4 326 aa13.46□□□□□ -0.25
CHRNE-201ENST00000293780 POLEQ07864 2286 aa13.46□□□□□ -0.26
CHRNE-201ENST00000293780 RPL27AP46776 148 aaKnown RBP13.46□□□□□ -0.26
CHRNE-201ENST00000293780 LGALS7P47929 136 aa13.46□□□□□ -0.26
CHRNE-201ENST00000293780 KLF5Q13887 457 aaPredicted RBP13.46□□□□□ -0.26
CHRNE-201ENST00000293780 KIR3DL3Q8N743 410 aa13.46□□□□□ -0.26
CHRNE-201ENST00000293780 GPR82Q96P67 336 aa13.46□□□□□ -0.26
CHRNE-201ENST00000293780 TRGV9Q99603 122 aa13.46□□□□□ -0.26
CHRNE-201ENST00000293780 TMEM133Q9H2Q1 129 aa13.46□□□□□ -0.26
CHRNE-201ENST00000293780 KLF12Q9Y4X4 402 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms