RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 C2orf88Q9BSF0 95 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 PSME4Q14997 1843 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 ZNF479Q96JC4 524 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 DOCK8Q8NF50 2099 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 ATP5J2P56134 94 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 COPS9Q8WXC6 57 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
TRAPPC10-201ENST00000291574 A0A087X0K7 114 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 NCR2O95944 276 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 PDLIM4P50479 330 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 A0A1B0GUS0 222 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 CHCHD1Q96BP2 118 aaKnown RBP11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 MRPS18CQ9Y3D5 142 aaKnown RBP11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 MYOD1P15172 320 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 HAX1O00165 279 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 SPSB3Q6PJ21 355 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 ZNF138P52744 262 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 SAMD5Q5TGI4 173 aa11.25□□□□□ -0.61
TRAPPC10-201ENST00000291574 SEC11AP67812 179 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 SIGMAR1Q99720 223 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 NBR2O15453 112 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 LILRA1O75019 489 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 NTF4P34130 210 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 H7C1H1 209 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 OR5A1Q8NGJ0 315 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 ASCL2Q99929 193 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 IGHV4-39P01824 125 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 GGNQ86UU5 652 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 METRNQ9UJH8 293 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 ANK1P16157 1881 aa11.24□□□□□ -0.61
TRAPPC10-201ENST00000291574 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 LRRC37A2A6NM11 1700 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 HSD52Q0P140 79 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 TMEM133Q9H2Q1 129 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 LYL1P12980 280 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 FHL1Q13642 323 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 RALGAPA2Q2PPJ7 1873 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 LINC00473A8K010 186 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 TMEM262E9PQX1 116 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 IGKCP01834 107 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 GUSBP1Q15486 140 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 ATP5L2Q7Z4Y8 100 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 PVRIGQ6DKI7 326 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 DEFB104AQ8WTQ1 72 aa11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC10-201ENST00000291574 D6R8Y8 96 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 SRSF1Q07955 248 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 RSPO3Q9BXY4 272 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 CLPSP04118 112 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 CD7P09564 240 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 UCNP55089 124 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 PPBPP02775 128 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 SRSF7Q16629 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 TPTE2P1Q5T6R2 138 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 NUP35Q8NFH5 326 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 TRAV2A0A0B4J234 112 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 PIMREGQ9BSJ6 248 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
TRAPPC10-201ENST00000291574 A0A0G2JLM5 398 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 C8orf46Q8TAG6 207 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 VCX2Q9H322 139 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 FAM90A9PA6NNJ1 464 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 A8MWP6 167 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 PSG1P11464 419 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 C20orf204Q6ZNR8 217 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 SPRR3Q9UBC9 169 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 PTPRDP23468 1912 aa11.21□□□□□ -0.61
TRAPPC10-201ENST00000291574 SRRM5B3KS81 715 aa11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 LINC00479Q96M42 142 aa11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 TIMM23O14925 209 aa11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 DUX3Q96PT4 197 aa11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 MLANAQ16655 118 aa11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 GAGE13Q4V321 117 aa11.21□□□□□ -0.62
TRAPPC10-201ENST00000291574 C15orf62A8K5M9 175 aa11.2□□□□□ -0.62
TRAPPC10-201ENST00000291574 TDGF1P3P51864 188 aa11.2□□□□□ -0.62
TRAPPC10-201ENST00000291574 SLC25A48Q6ZT89 311 aaKnown RBP11.2□□□□□ -0.62
TRAPPC10-201ENST00000291574 TEX29Q8N6K0 151 aa11.2□□□□□ -0.62
TRAPPC10-201ENST00000291574 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms