RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 TMEM238LA0A1B0GVL6 79 aa15.15■□□□□ 0.02
SHF-201ENST00000290894 GGCTO75223 188 aaKnown RBP15.15■□□□□ 0.02
SHF-201ENST00000290894 FXYD3Q14802 87 aa15.15■□□□□ 0.02
SHF-201ENST00000290894 OR10G8Q8NGN5 311 aa15.15■□□□□ 0.02
SHF-201ENST00000290894 FAM208BQ5VWN6 2430 aa15.14■□□□□ 0.01
SHF-201ENST00000290894 ABCA2Q9BZC7 2435 aa15.14■□□□□ 0.01
SHF-201ENST00000290894 HOXB4P17483 251 aaPredicted RBP15.14■□□□□ 0.01
SHF-201ENST00000290894 SRP14P37108 136 aaKnown RBP15.14■□□□□ 0.01
SHF-201ENST00000290894 SELENOTP62341 195 aa15.14■□□□□ 0.01
SHF-201ENST00000290894 RANP62826 216 aaKnown RBP15.14■□□□□ 0.01
SHF-201ENST00000290894 ELOA3CA0A087WX78 387 aaPredicted RBP15.14■□□□□ 0.01
SHF-201ENST00000290894 EFNA4P52798 201 aa15.14■□□□□ 0.01
SHF-201ENST00000290894 SGK494Q96LW2 274 aa15.14■□□□□ 0.01
SHF-201ENST00000290894 RNASE7Q9H1E1 156 aaKnown RBP15.14■□□□□ 0.01
SHF-201ENST00000290894 TRAV34A0A0B4J273 112 aa15.13■□□□□ 0.01
SHF-201ENST00000290894 CD99P14209 185 aa15.13■□□□□ 0.01
SHF-201ENST00000290894 ERVFC1-1P60608 527 aa15.13■□□□□ 0.01
SHF-201ENST00000290894 PVRIGQ6DKI7 326 aa15.13■□□□□ 0.01
SHF-201ENST00000290894 A0A1W2PRE2 83 aa15.13■□□□□ 0.01
SHF-201ENST00000290894 FABP4P15090 132 aa15.13■□□□□ 0.01
SHF-201ENST00000290894 FXYD5Q96DB9 178 aa15.13■□□□□ 0.01
SHF-201ENST00000290894 PRB4P10163 310 aaPredicted RBP15.12■□□□□ 0.01
SHF-201ENST00000290894 PSG1P11464 419 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 LYZP61626 148 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 GNG5P63218 68 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 TIGITQ495A1 244 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 CDPF1Q6NVV7 123 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 TRGV9Q99603 122 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 I3L2K1 104 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 RD3LP0DJH9 198 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 MGST1P10620 155 aaKnown RBP15.12■□□□□ 0.01
SHF-201ENST00000290894 RNF2Q99496 336 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 RNF5Q99942 180 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 RPH3ALQ9UNE2 315 aa15.12■□□□□ 0.01
SHF-201ENST00000290894 ZNF462Q96JM2 2506 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 C9JCJ5 164 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 NDPQ00604 133 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 LRRK2Q5S007 2527 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 CORTO00230 105 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 FRMD6-AS1P0C7T7 363 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 IGLC1P0CG04 106 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 C5orf64Q2M2E5 130 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 ARL2-SNX15V9GYD0 113 aa15.11■□□□□ 0.01
SHF-201ENST00000290894 POLQO75417 2590 aa15.1■□□□□ 0.01
SHF-201ENST00000290894 SPINK4O60575 86 aa15.1■□□□□ 0.01
SHF-201ENST00000290894 HYPMO75409 117 aa15.1■□□□□ 0.01
SHF-201ENST00000290894 TOX4O94842 621 aa15.1■□□□□ 0.01
SHF-201ENST00000290894 SIRPDQ9H106 197 aa15.1■□□□□ 0.01
SHF-201ENST00000290894 PITPNC1Q9UKF7 332 aa15.1■□□□□ 0.01
SHF-201ENST00000290894 PERPQ96FX8 193 aa15.1■□□□□ 0.01
SHF-201ENST00000290894 K7EIM0 57 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 SLC35B1P78383 322 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 CX3CL1P78423 397 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 FAM120AOSQ5T036 256 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 ZNF329Q86UD4 541 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 KIR3DL3Q8N743 410 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 NPBQ8NG41 125 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 NDUFA3O95167 84 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 PCP4P48539 62 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 PAX2Q02962 417 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 FOXL1Q12952 345 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 C21orf62-AS1Q17RA5 79 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 ACTL10Q5JWF8 245 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 RASL11BQ9BPW5 248 aa15.09■□□□□ 0.01
SHF-201ENST00000290894 TCL1AP56279 114 aa15.08■□□□□ 0.01
SHF-201ENST00000290894 LMO4P61968 165 aa15.08■□□□□ 0.01
SHF-201ENST00000290894 XKRY2A2RUG3 117 aa15.08■□□□□ 0
SHF-201ENST00000290894 CA1P00915 261 aaPredicted RBP15.08■□□□□ 0
SHF-201ENST00000290894 IGKV1-17P01599 117 aa15.08■□□□□ 0
SHF-201ENST00000290894 IGLV2-8P01709 118 aa15.08■□□□□ 0
SHF-201ENST00000290894 IGHV3-23P01764 117 aa15.08■□□□□ 0
SHF-201ENST00000290894 IGHV4-39P01824 125 aa15.08■□□□□ 0
SHF-201ENST00000290894 TBX15Q96SF7 602 aa15.08■□□□□ 0
SHF-201ENST00000290894 HIST1H2BLQ99880 126 aa15.08■□□□□ 0
SHF-201ENST00000290894 IGHV3OR16-10A0A075B7F0 116 aa15.07■□□□□ 0
SHF-201ENST00000290894 IGHV2-70DA0A0C4DH43 119 aa15.07■□□□□ 0
SHF-201ENST00000290894 RNF224P0DH78 156 aa15.07■□□□□ 0
SHF-201ENST00000290894 IGF2BP2-AS1Q96M15 143 aa15.07■□□□□ 0
SHF-201ENST00000290894 PACRGQ96M98 296 aaPredicted RBP15.07■□□□□ 0
SHF-201ENST00000290894 TRAPPC1Q9Y5R8 145 aa15.07■□□□□ 0
SHF-201ENST00000290894 V9GYV3 84 aa15.07■□□□□ 0
SHF-201ENST00000290894 EPG5Q9HCE0 2579 aa15.07■□□□□ 0
SHF-201ENST00000290894 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.07■□□□□ 05e-10■■■■□ 26.3
SHF-201ENST00000290894 A0A1B0GUS0 222 aa15.07■□□□□ 0
SHF-201ENST00000290894 ISLRO14498 428 aa15.07■□□□□ 0
SHF-201ENST00000290894 TYMSP04818 313 aa15.07■□□□□ 0
SHF-201ENST00000290894 TMEM11P17152 192 aa15.07■□□□□ 0
SHF-201ENST00000290894 C1orf122Q6ZSJ8 110 aa15.07■□□□□ 0
SHF-201ENST00000290894 IMMP2LQ96T52 175 aa15.07■□□□□ 0
SHF-201ENST00000290894 NBEAP1P0C6P0 100 aa15.06■□□□□ 0
SHF-201ENST00000290894 CBLN1P23435 193 aa15.06■□□□□ 0
SHF-201ENST00000290894 CCDC144NLQ6NUI1 221 aa15.06■□□□□ 0
SHF-201ENST00000290894 TMEM183AQ8IXX5 376 aa15.06■□□□□ 0
SHF-201ENST00000290894 OR8I2Q8N0Y5 310 aa15.06■□□□□ 0
SHF-201ENST00000290894 ARPC1AQ92747 370 aa15.06■□□□□ 0
SHF-201ENST00000290894 SERTAD4Q9NUC0 356 aa15.06■□□□□ 0
SHF-201ENST00000290894 IL36BQ9NZH7 164 aa15.06■□□□□ 0
SHF-201ENST00000290894 PGPA6NDG6 321 aa15.06■□□□□ 0
SHF-201ENST00000290894 PEX7O00628 323 aa15.06■□□□□ 0
SHF-201ENST00000290894 RPL15P61313 204 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms