RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 ZNF474Q6S9Z5 364 aaPredicted RBP12.25□□□□□ -0.45
SEC16A-202ENST00000290037 GGNQ86UU5 652 aa12.25□□□□□ -0.45
SEC16A-202ENST00000290037 LURAP1LQ8IV03 231 aa12.25□□□□□ -0.45
SEC16A-202ENST00000290037 LINC00311Q8N616 119 aa12.25□□□□□ -0.45
SEC16A-202ENST00000290037 TREML4Q6UXN2 200 aa12.25□□□□□ -0.45
SEC16A-202ENST00000290037 SIGLEC15Q6ZMC9 328 aa12.25□□□□□ -0.45
SEC16A-202ENST00000290037 ABCA4P78363 2273 aa12.25□□□□□ -0.45
SEC16A-202ENST00000290037 ZNRF1Q8ND25 227 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 VCYO14598 125 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 TMEM14CQ9P0S9 112 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 C1QL2Q7Z5L3 287 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 C9orf172C9J069 976 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 CTAG1AP78358 180 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 C11orf68Q9H3H3 251 aaKnown RBP12.24□□□□□ -0.45
SEC16A-202ENST00000290037 PSG8Q9UQ74 426 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 PF4P02776 101 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 TFF3Q07654 80 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 VDAC2P45880 294 aaPredicted RBP12.24□□□□□ -0.45
SEC16A-202ENST00000290037 GGTLC1Q9BX51 225 aa12.24□□□□□ -0.45
SEC16A-202ENST00000290037 EFNA4P52798 201 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 TMEM141Q96I45 108 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 WNT10AQ9GZT5 417 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 PRR32B1ATL7 298 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 H3BUA1 57 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 PAX8Q06710 450 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 TMEM160Q9NX00 188 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 CREBBPQ92793 2442 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 HIST1H2BLQ99880 126 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 MED12Q93074 2177 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 E9PQ18 207 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 SERF1AO75920 110 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 CELA2AP08217 269 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 PLCE1Q9P212 2302 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 YPEL3P61236 119 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-202ENST00000290037 HIST3H2BBQ8N257 126 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 SLC25A16P16260 332 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 DUX3Q96PT4 197 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 MSGN1A6NI15 193 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 PROB1E7EW31 1015 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 CRXO43186 299 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-202ENST00000290037 LINC01551Q86U37 167 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 IFI27L1Q96BM0 104 aa12.23□□□□□ -0.45
SEC16A-202ENST00000290037 ZNF138P52744 262 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 PATE3B3GLJ2 98 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 HOXA3O43365 443 aaPredicted RBP12.22□□□□□ -0.45
SEC16A-202ENST00000290037 IGKV3-15P01624 115 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 COL9A2Q14055 689 aaPredicted RBP12.22□□□□□ -0.45
SEC16A-202ENST00000290037 IGFL3Q6UXB1 125 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 COQ2Q96H96 371 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 PNRC2Q9NPJ4 139 aaKnown RBP12.22□□□□□ -0.45
SEC16A-202ENST00000290037 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 COLCA2A8K830 154 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 A8MWV9 139 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 LGALS1P09382 135 aaKnown RBP12.22□□□□□ -0.45
SEC16A-202ENST00000290037 INAFM2P0DMQ5 153 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 C10orf91Q5T1B1 145 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 FOXC2Q99958 501 aa12.22□□□□□ -0.45
SEC16A-202ENST00000290037 A0A1W2PPE3 182 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 CRPP02741 224 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 TPRX1Q8N7U7 411 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 TGFBR3LH3BV60 316 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 RFPL3SP0C7P2 107 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 ST6GALNAC3Q8NDV1 305 aa12.21□□□□□ -0.45
SEC16A-202ENST00000290037 A0A1B0GWB2 263 aa12.21□□□□□ -0.46
SEC16A-202ENST00000290037 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.46
SEC16A-202ENST00000290037 GTSCR1Q86UQ5 136 aa12.21□□□□□ -0.46
SEC16A-202ENST00000290037 F11RQ9Y624 299 aaKnown RBP12.21□□□□□ -0.46
SEC16A-202ENST00000290037 NOTCH3Q9UM47 2321 aa12.21□□□□□ -0.46
SEC16A-202ENST00000290037 CADP27708 2225 aa12.21□□□□□ -0.46
SEC16A-202ENST00000290037 ZNF585BQ52M93 769 aa12.21□□□□□ -0.46
SEC16A-202ENST00000290037 TFF2Q03403 129 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 KLF17Q5JT82 389 aaPredicted RBP12.2□□□□□ -0.46
SEC16A-202ENST00000290037 J3QLI3 93 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 COL6A6A6NMZ7 2263 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 TIAF1O95411 115 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 IGHV1-8P0DP01 117 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 CCL3L1P16619 93 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 ADAMTS9Q9P2N4 1935 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 C20orf144Q9BQM9 153 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 AURKAIP1Q9NWT8 199 aaPredicted RBP12.2□□□□□ -0.46
SEC16A-202ENST00000290037 FAM90A2PQ658T7 463 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 MDS2Q8NDY4 140 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 LYZL4Q96KX0 146 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 COLCA1Q6ZS62 124 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 MIR17HGQ75NE6 70 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 SIGLEC12Q96PQ1 595 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 MEX3AA1L020 520 aaKnown RBP12.2□□□□□ -0.46
SEC16A-202ENST00000290037 HCFC1P51610 2035 aa12.2□□□□□ -0.46
SEC16A-202ENST00000290037 TMEM178BH3BS89 294 aa12.19□□□□□ -0.46
SEC16A-202ENST00000290037 PSG3Q16557 428 aa12.19□□□□□ -0.46
SEC16A-202ENST00000290037 TAL2Q16559 108 aa12.19□□□□□ -0.46
SEC16A-202ENST00000290037 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
SEC16A-202ENST00000290037 LINC00469Q8N7U9 141 aa12.19□□□□□ -0.46
SEC16A-202ENST00000290037 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
SEC16A-202ENST00000290037 TMEM14BQ9NUH8 114 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms