RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 DEFA3P59666 94 aa11.37□□□□□ -0.59
PDE6D-201ENST00000287600 SPANXN5Q5MJ07 72 aa11.37□□□□□ -0.59
PDE6D-201ENST00000287600 NRARPQ7Z6K4 114 aa11.37□□□□□ -0.59
PDE6D-201ENST00000287600 ZBTB8BQ8NAP8 495 aaPredicted RBP11.37□□□□□ -0.59
PDE6D-201ENST00000287600 Q8WTZ3 238 aa11.37□□□□□ -0.59
PDE6D-201ENST00000287600 CHEK1O14757 476 aa11.36□□□□□ -0.59
PDE6D-201ENST00000287600 SSSCA1O60232 199 aa11.36□□□□□ -0.59
PDE6D-201ENST00000287600 YPEL3P61236 119 aaPredicted RBP11.36□□□□□ -0.59
PDE6D-201ENST00000287600 GAMTQ14353 236 aa11.36□□□□□ -0.59
PDE6D-201ENST00000287600 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
PDE6D-201ENST00000287600 RNF2Q99496 336 aa11.36□□□□□ -0.59
PDE6D-201ENST00000287600 STRAPQ9Y3F4 350 aaKnown RBP11.36□□□□□ -0.59
PDE6D-201ENST00000287600 C5orf51A6NDU8 294 aa11.35□□□□□ -0.59
PDE6D-201ENST00000287600 TSPAN4O14817 238 aa11.35□□□□□ -0.59
PDE6D-201ENST00000287600 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
PDE6D-201ENST00000287600 IL5P05113 134 aa11.35□□□□□ -0.59
PDE6D-201ENST00000287600 NPPCP23582 126 aa11.35□□□□□ -0.59
PDE6D-201ENST00000287600 SPAG8Q99932 426 aaPredicted RBP11.35□□□□□ -0.59
PDE6D-201ENST00000287600 PSENENQ9NZ42 101 aa11.35□□□□□ -0.59
PDE6D-201ENST00000287600 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
PDE6D-201ENST00000287600 IGHV3-66A0A0C4DH42 116 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 ZFP92A6NM28 416 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 RD3LP0DJH9 198 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 BMI1P35226 326 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 ST8SIA2Q92186 375 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 SMIM8Q96KF7 97 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 METTL26Q96S19 204 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 GGTLC1Q9BX51 225 aa11.34□□□□□ -0.59
PDE6D-201ENST00000287600 GPN1Q9HCN4 374 aaPredicted RBP11.34□□□□□ -0.59
PDE6D-201ENST00000287600 IGKV3-7A0A075B6H7 116 aa11.33□□□□□ -0.6
PDE6D-201ENST00000287600 INMT-MINDY4F8WBC2 141 aa11.33□□□□□ -0.6
PDE6D-201ENST00000287600 TOMM40O96008 361 aa11.33□□□□□ -0.6
PDE6D-201ENST00000287600 MBPP02686 304 aaPredicted RBP11.33□□□□□ -0.6
PDE6D-201ENST00000287600 PAX9P55771 341 aa11.33□□□□□ -0.6
PDE6D-201ENST00000287600 LILRB2Q8N423 598 aa11.33□□□□□ -0.6
PDE6D-201ENST00000287600 RAB40CQ96S21 281 aa11.33□□□□□ -0.6
PDE6D-201ENST00000287600 VSIRQ9H7M9 311 aa11.33□□□□□ -0.6
PDE6D-201ENST00000287600 PLECQ15149 4684 aaKnown RBP11.32□□□□□ -0.6
PDE6D-201ENST00000287600 LOC102724200A0A096LPH7 203 aaPredicted RBP11.32□□□□□ -0.6
PDE6D-201ENST00000287600 A0A1W2PS18 150 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 OR4C46A6NHA9 309 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 IL4P05112 153 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 PSG1P11464 419 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 CRYBB3P26998 211 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 TFPI2P48307 235 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 ZNF90Q03938 601 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 GSG1LQ6UXU4 331 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 TMEM231Q9H6L2 316 aa11.32□□□□□ -0.6
PDE6D-201ENST00000287600 RCL1Q9Y2P8 373 aaKnown RBP11.32□□□□□ -0.6
PDE6D-201ENST00000287600 IGKV1D-37A0A075B6S9 117 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 PRAF2O60831 178 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 DFFBO76075 338 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
PDE6D-201ENST00000287600 USF2Q15853 346 aaPredicted RBP11.31□□□□□ -0.6
PDE6D-201ENST00000287600 FAM90A2PQ658T7 463 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 OR8G2PQ6IF36 304 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 NARS2Q96I59 477 aaKnown RBP11.31□□□□□ -0.6
PDE6D-201ENST00000287600 MARVELD1Q9BSK0 173 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 UBQLN2Q9UHD9 624 aa11.31□□□□□ -0.6
PDE6D-201ENST00000287600 LSM5Q9Y4Y9 91 aaKnown RBP11.31□□□□□ -0.6
PDE6D-201ENST00000287600 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 SNRPGP15A8MWD9 76 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 L7N2F9 121 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 CD5P06127 495 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 FABP1P07148 127 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 HNRNPCP07910 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDE6D-201ENST00000287600 METTL15P1P0C7V9 234 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 TAS2R30P59541 319 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 VAMP2P63027 116 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 PAFAH1B2P68402 229 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 OR2F1Q13607 317 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 TMEM14EPQ6UXP3 125 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 ACOT7LQ6ZUV0 252 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 OR51G1Q8NGK1 321 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 GRAMD2BQ96HH9 432 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 PBDC1Q9BVG4 233 aa11.3□□□□□ -0.6
PDE6D-201ENST00000287600 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 SMCO3A2RU48 225 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 CXorf65A6NEN9 183 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 K7EPK0 472 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 TSC22D2O75157 780 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 CCNKO75909 580 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 P2RY1P47900 373 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 AKR1C1Q04828 323 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 PMS2P11Q13670 270 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 WFDC3Q8IUB2 231 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 THAP8Q8NA92 274 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 LINC00476Q8WZB0 136 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 TRGV9Q99603 122 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 RABAC1Q9UI14 185 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 U3KQE9 123 aa11.29□□□□□ -0.6
PDE6D-201ENST00000287600 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
PDE6D-201ENST00000287600 BCAP31P51572 246 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms