RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 LINC01619G3V211 115 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 CCL24O00175 119 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 TOMM40O96008 361 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 SLURP1P55000 103 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 PRR20EP86478 221 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 PRR20CP86479 221 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 PRR20DP86480 221 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 PRR20BP86481 221 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 PRR20AP86496 221 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 ZNF616Q08AN1 781 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 GINS3Q9BRX5 216 aa16.7■□□□□ 0.26
PDLIM3-203ENST00000284771 VWFP04275 2813 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 RPL29P47914 159 aaKnown RBP16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 TOMM20LQ6UXN7 152 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 ZNF600Q6ZNG1 722 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 ZFAND3Q9H8U3 227 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 RAB31Q13636 194 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 RPEL1Q2QD12 228 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 GPHB5Q86YW7 130 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 STPG3Q8N7X2 389 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 STOML3Q8TAV4 291 aa16.69■□□□□ 0.26
PDLIM3-203ENST00000284771 RELQ04864 619 aaPredicted RBP16.68■□□□□ 0.26
PDLIM3-203ENST00000284771 KLF5Q13887 457 aaPredicted RBP16.68■□□□□ 0.26
PDLIM3-203ENST00000284771 SLC51BQ86UW2 128 aa16.68■□□□□ 0.26
PDLIM3-203ENST00000284771 OR51G1Q8NGK1 321 aa16.68■□□□□ 0.26
PDLIM3-203ENST00000284771 Q8WTZ3 238 aa16.68■□□□□ 0.26
PDLIM3-203ENST00000284771 DPF1Q92782 380 aa16.68■□□□□ 0.26
PDLIM3-203ENST00000284771 PXMP4Q9Y6I8 212 aa16.68■□□□□ 0.26
PDLIM3-203ENST00000284771 WI2-2373I1.2A0A1W2PRP0 233 aa16.67■□□□□ 0.26
PDLIM3-203ENST00000284771 NDUFA4O00483 81 aa16.67■□□□□ 0.26
PDLIM3-203ENST00000284771 YIF1AO95070 293 aa16.67■□□□□ 0.26
PDLIM3-203ENST00000284771 SELENOTP62341 195 aa16.67■□□□□ 0.26
PDLIM3-203ENST00000284771 BAP18Q8IXM2 172 aa16.67■□□□□ 0.26
PDLIM3-203ENST00000284771 PLA2G2EQ9NZK7 142 aa16.67■□□□□ 0.26
PDLIM3-203ENST00000284771 SCGB2A1O75556 95 aa16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 IL4P05112 153 aa16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 B2MP61769 119 aa16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 USF2Q15853 346 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 GCSAMLQ5JQS6 135 aa16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 ST8SIA2Q92186 375 aa16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 DLX4Q92988 240 aaPredicted RBP16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 SLC25A32Q9H2D1 315 aa16.66■□□□□ 0.26
PDLIM3-203ENST00000284771 SPP1P10451 314 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 ZP3P21754 424 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 SYNJ2BPP57105 145 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 SHISA2Q6UWI4 295 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 PATE2Q6UY27 113 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 ZNF709Q8N972 641 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 SLC39A9Q9NUM3 307 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 TIMM9Q9Y5J7 89 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 C17orf112F2Z3M2 114 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 TPT1P13693 172 aaKnown RBP16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 TMEM37Q8WXS4 190 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 GNPNAT1Q96EK6 184 aaPredicted RBP16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 RNF125Q96EQ8 232 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 PSMG3Q9BT73 122 aaPredicted RBP16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 VSIRQ9H7M9 311 aa16.65■□□□□ 0.26
PDLIM3-203ENST00000284771 ZNF320A2RRD8 509 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 CFDP00746 253 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 FABP1P07148 127 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 EDN2P20800 178 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 C4BPBP20851 252 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 MYCNOSP40205 109 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 PLP1P60201 277 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 LYZP61626 148 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 TMEM190Q8WZ59 177 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 DOK5Q9P104 306 aa16.64■□□□□ 0.25
PDLIM3-203ENST00000284771 TSPAN15O95858 294 aa16.63■□□□□ 0.25
PDLIM3-203ENST00000284771 ORM2P19652 201 aa16.63■□□□□ 0.25
PDLIM3-203ENST00000284771 FAM106AQ4KMX7 169 aa16.63■□□□□ 0.25
PDLIM3-203ENST00000284771 C20orf24Q9BUV8 137 aa16.63■□□□□ 0.25
PDLIM3-203ENST00000284771 PBDC1Q9BVG4 233 aa16.63■□□□□ 0.25
PDLIM3-203ENST00000284771 ZNF207O43670 478 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 TM4SF20Q53R12 229 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 FFAR4Q5NUL3 377 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 C1QL4Q86Z23 238 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 OR2G3Q8NGZ4 309 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 SPATA3Q8NHX4 192 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 TMED6Q8WW62 240 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 MRPL27Q9P0M9 148 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 LGALS9O00182 355 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 ELLP55199 621 aaPredicted RBP16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 EIF5AP63241 154 aaKnown RBP16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 Q6ZRG5 221 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 OR1B1Q8NGR6 318 aa16.62■□□□□ 0.25
PDLIM3-203ENST00000284771 SEC11BP0C7V7 166 aa16.61■□□□□ 0.25
PDLIM3-203ENST00000284771 SERF2P84101 59 aa16.61■□□□□ 0.25
PDLIM3-203ENST00000284771 REC114Q7Z4M0 266 aa16.61■□□□□ 0.25
PDLIM3-203ENST00000284771 OR4F17Q8NGA8 305 aa16.61■□□□□ 0.25
PDLIM3-203ENST00000284771 UHRF2Q96PU4 802 aa16.61■□□□□ 0.25
PDLIM3-203ENST00000284771 OR4F4Q96R69 305 aa16.61■□□□□ 0.25
PDLIM3-203ENST00000284771 APOHP02749 345 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-203ENST00000284771 TMEM213A2RRL7 107 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 A8MWP6 167 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 RAB2AP61019 212 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 MORN5Q5VZ52 161 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 IL34Q6ZMJ4 242 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 LINC00482Q8N8I6 264 aa16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 SEPSECSQ9HD40 501 aaKnown RBP16.59■□□□□ 0.25
PDLIM3-203ENST00000284771 DNAJC4Q9NNZ3 241 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms