RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 ZNF876PQ49A33 203 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 CD177Q8N6Q3 437 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 MCRIP2Q9BUT9 160 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 TCF20Q9UGU0 1960 aaKnown RBP12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 PCNX1Q96RV3 2341 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 LINC01619G3V211 115 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 EFNA2O43921 213 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 CRIPAKQ8N1N5 446 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 Q6AWC8 147 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 ZNF506Q5JVG8 444 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 CYSLTR1Q9Y271 337 aa12.13□□□□□ -0.47
TRAPPC8-201ENST00000283351 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 CD55P08174 381 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 LINC00271P0C7V0 271 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 RNF182Q8N6D2 247 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 C1orf159Q96HA4 380 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 PKDREJQ9NTG1 2253 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 MTCL1Q9Y4B5 1905 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 LY75O60449 1722 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 IGHG3P01860 377 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 DANCRP0C864 163 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 RBM38Q9H0Z9 239 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 H2BFSP57053 126 aa12.12□□□□□ -0.47
TRAPPC8-201ENST00000283351 DLEC1Q9Y238 1755 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 PI4KAP42356 2102 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 F8WEM9 126 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 WISP1O95388 367 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 IGFL4Q6B9Z1 124 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 GAFA1Q96PS6 74 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 INS-IGF2F8WCM5 200 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 PLP1P60201 277 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 EPDR1Q9UM22 224 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 PSG1P11464 419 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 TMEM249Q2WGJ8 235 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 IGHV1-69DA0A0B4J2H0 117 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 IGKV1-9A0A0C4DH69 117 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 IGHV1-69P01742 117 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 CD200R1LQ6Q8B3 271 aa12.11□□□□□ -0.47
TRAPPC8-201ENST00000283351 TRBV9A0A0B4J1U6 114 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 A0A1B0GV72 72 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 TCF23Q7RTU1 214 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 IMMP2LQ96T52 175 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 TRAF4Q9BUZ4 470 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 NRN1Q9NPD7 142 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 TRAV5A0A0B4J249 113 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 C17orf82Q86X59 251 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 FAM223BA6NKX1 122 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 SRSF4Q08170 494 aaKnown RBP12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 FAM223AQ8IWN6 122 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 SCRT1Q9BWW7 348 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 DAZ1Q9NQZ3 744 aaKnown RBP12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 PARP14Q460N5 1801 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 PAX4O43316 350 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 C6orf226Q5I0X4 101 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 WNK2Q9Y3S1 2297 aa12.1□□□□□ -0.47
TRAPPC8-201ENST00000283351 HBDP02042 147 aa12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 APOC4P55056 127 aa12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 FAM208BQ5VWN6 2430 aa12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 LRRC37AA6NMS7 1700 aa12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 PRTN3P24158 256 aa12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 TMEM95Q3KNT9 176 aa12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 SLC25A48Q6ZT89 311 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■■■□□ 16.6
TRAPPC8-201ENST00000283351 TBX6O95947 436 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 NPC2P61916 151 aa12.09□□□□□ -0.47
TRAPPC8-201ENST00000283351 TRAV2A0A0B4J234 112 aa12.08□□□□□ -0.47
TRAPPC8-201ENST00000283351 A0A1B0GWJ7 208 aa12.08□□□□□ -0.47
TRAPPC8-201ENST00000283351 RTBDNQ9BSG5 229 aaPredicted RBP12.08□□□□□ -0.47
TRAPPC8-201ENST00000283351 SSBP4Q9BWG4 385 aaPredicted RBP12.08□□□□□ -0.47
TRAPPC8-201ENST00000283351 A0A1B0GW15 77 aa12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 EXOC3-AS1Q8N2X6 119 aa12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 DLX4Q92988 240 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 IL36BQ9NZH7 164 aa12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 PTPRQQ9UMZ3 2332 aa12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 MST1LQ2TV78 715 aa12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 SDHCQ99643 169 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 C9orf139Q6ZV77 190 aa12.08□□□□□ -0.48
TRAPPC8-201ENST00000283351 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 OTOFQ9HC10 1997 aa12.07□□□□□ -0.48
TRAPPC8-201ENST00000283351 MED12Q93074 2177 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms