RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TEX48A0A1B0GUV7 120 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 SRRM4A7MD48 611 aaKnown RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 TOMM40O96008 361 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 PSG1P11464 419 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 NAT1P18440 290 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 CCL1P22362 96 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 OTX1P32242 354 aaPredicted RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 SS18Q15532 418 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 SLC25A39Q9BZJ4 359 aaPredicted RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 DMRT1Q9Y5R6 373 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 PRRC2AP48634 2157 aaKnown RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 LOC102724200A0A096LPH7 203 aaPredicted RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 A0A1B0GWJ7 208 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 PGPEP1LA6NFU8 196 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 CGAP01215 116 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 INAFM2P0DMQ5 153 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 ERCC8Q13216 396 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 C5orf64Q2M2E5 130 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 C3orf36Q3SXR2 165 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 CRIM1Q9NZV1 1036 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV2-26A0A0B4J1V2 119 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 MYMXA0A1B0GTQ4 84 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 VWC2LB2RUY7 222 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 J3QLI3 93 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 LYPD1Q8N2G4 141 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 NRTNQ99748 197 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 LAMTOR3Q9UHA4 124 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 MSRB2Q9Y3D2 182 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 A0A0G2JK05 382 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 TIAF1O95411 115 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 APOC4P55056 127 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 LINC00158P58513 81 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 ZFP36L1Q07352 338 aaKnown RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 LAGE3Q14657 143 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 IL17RELQ6ZVW7 336 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 PUSL1Q8N0Z8 303 aaKnown RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 WFIKKN1Q96NZ8 548 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 CHAC1Q9BUX1 264 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 NHP2Q9NX24 153 aaKnown RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 FOCADQ5VW36 1801 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 SRSF7Q16629 238 aaKnown RBP eCLIP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF497Q6ZNH5 498 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 NKAPP1Q8N9T2 125 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 CHCHD1Q96BP2 118 aaKnown RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 IMMP2LQ96T52 175 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 TRGV9Q99603 122 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 ACANP16112 2415 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV1-8P0DP01 117 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 GZMBP10144 247 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 CRYBA2P53672 197 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 KLHL30-AS1Q8NEE0 82 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 TSKUQ8WUA8 353 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 LINC00477Q96M19 166 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 GRIFINA4D1Z8 144 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 H3BUX3 64 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 ERVH48-1M5A8F1 160 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 DUTP33316 252 aaKnown RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF672Q499Z4 452 aaPredicted RBP3.38□□□□□ -1.87
SCN3A-201ENST00000283254 FBLN7Q53RD9 439 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 Q5PR19 223 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 FAM89BQ8N5H3 189 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 ORAOV1Q8WV07 137 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 WBP1Q96G27 269 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 EPDR1Q9UM22 224 aa3.38□□□□□ -1.87
SCN3A-201ENST00000283254 LY6G5BQ8NDX9 201 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 PLSCR4Q9NRQ2 329 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 A0A1B0GUS0 222 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF561-AS1K7EIQ3 104 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 TMEM95Q3KNT9 176 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 MORN2Q502X0 79 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 C6orf226Q5I0X4 101 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 DERL1Q9BUN8 251 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 PRDM6Q9NQX0 595 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV3OR16-8A0A075B7F1 116 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 VCYO14598 125 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 CA1P00915 261 aaPredicted RBP3.37□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF138P52744 262 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 FOXL2P58012 376 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 LY6DQ14210 128 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 CARHSP1Q9Y2V2 147 aaKnown RBP3.37□□□□□ -1.87
SCN3A-201ENST00000283254 A8MWV9 139 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 J3QKU1 62 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV3-48P01763 117 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 ZNF250P15622 560 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 DMRTA1Q5VZB9 504 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 SPRED2Q7Z698 418 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 TMEM105Q8N8V8 129 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 C1orf159Q96HA4 380 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 DMRTA2Q96SC8 542 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 IGHV3-66A0A0C4DH42 116 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 NTN3O00634 580 aaPredicted RBP3.37□□□□□ -1.87
SCN3A-201ENST00000283254 CCL3L1P16619 93 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 H2BFSP57053 126 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 SPATA31B1PQ5VZV4 182 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 PIP4P2Q8N4L2 257 aa3.37□□□□□ -1.87
SCN3A-201ENST00000283254 MBNL3Q9NUK0 354 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms