RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 IMMP2LQ96T52 175 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 MED13Q9UHV7 2174 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 H3BUX3 64 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 PAX8Q06710 450 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 C15orf32Q32M92 178 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 Q6AWC8 147 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 FER1L6-AS1Q8NA97 138 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 MBD3L1Q8WWY6 194 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 DUX3Q96PT4 197 aa9.26□□□□□ -0.93
USP6NL-201ENST00000277575 TNFSF13O75888 250 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 SPATA45Q537H7 98 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 C8orf46Q8TAG6 207 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 VSIRQ9H7M9 311 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 MYLKQ15746 1914 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 HIGD1CA8MV81 97 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 H7C1H1 209 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 M0R1W7 72 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 C1QTNF9P0C862 333 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 C5orf64Q2M2E5 130 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 KLF17Q5JT82 389 aaPredicted RBP9.25□□□□□ -0.93
USP6NL-201ENST00000277575 GLMPQ8WWB7 406 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 RNASE7Q9H1E1 156 aaKnown RBP9.25□□□□□ -0.93
USP6NL-201ENST00000277575 A0A087WWC5 75 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 H0YJW9 148 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 CEACAM8P31997 349 aaPredicted RBP9.25□□□□□ -0.93
USP6NL-201ENST00000277575 WNK1Q9H4A3 2382 aa9.25□□□□□ -0.93
USP6NL-201ENST00000277575 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 LBHQ53QV2 105 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-201ENST00000277575 TMEM14EPQ6UXP3 125 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 ASCL2Q99929 193 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
USP6NL-201ENST00000277575 BUB1B-PAK6H3BSN5 160 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 FAM209BQ5JX69 171 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 LDLRAD2Q5SZI1 272 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 KIR3DL3Q8N743 410 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 SOX21Q9Y651 276 aaPredicted RBP9.24□□□□□ -0.93
USP6NL-201ENST00000277575 PSG1P11464 419 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 GCSHP23434 173 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 RNASE4P34096 147 aaKnown RBP9.24□□□□□ -0.93
USP6NL-201ENST00000277575 SRSF3P84103 164 aaKnown RBP9.24□□□□□ -0.93
USP6NL-201ENST00000277575 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 LINC01587Q99440 93 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 GEMIN7Q9H840 131 aaKnown RBP9.24□□□□□ -0.93
USP6NL-201ENST00000277575 PSG8Q9UQ74 426 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 PGPEP1LA6NFU8 196 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 PPP1R17O96001 155 aa9.24□□□□□ -0.93
USP6NL-201ENST00000277575 TRAV5A0A0B4J249 113 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 A0A1B0GWJ7 208 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 C7orf71A4D174 169 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 NPFFO15130 113 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 PRTN3P24158 256 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 TMEM155Q4W5P6 130 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 RPP25LQ8N5L8 163 aaKnown RBP9.23□□□□□ -0.93
USP6NL-201ENST00000277575 C18orf15Q96N68 181 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 NTF4P34130 210 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 FAM71F2Q6NXP2 309 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 OCC1Q8TAD7 63 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 UQCR10Q9UDW1 63 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 SIGLEC9Q9Y336 463 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 CCDC168Q8NDH2 2452 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 COL5A1-AS1Q5SY13 56 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 CYTL1Q9NRR1 136 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 TMEM8BA6NDV4 472 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 A6NJY4 79 aa9.23□□□□□ -0.93
USP6NL-201ENST00000277575 A0A1B0GW15 77 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 PSMB11A5LHX3 300 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 PMS2P5A8MQ11 134 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 APOHP02749 345 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-201ENST00000277575 PAX1P15863 534 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 C12orf54Q6X4T0 127 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 Q6ZR03 302 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 TRAV9-1A0A075B6T8 112 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 IZUMO1RA6ND01 250 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 RPLP1P05386 114 aaKnown RBP9.22□□□□□ -0.93
USP6NL-201ENST00000277575 ZNF585BQ52M93 769 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 Q6ZRM9 215 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 OSTCQ9NRP0 149 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 A0A0G2JRQ6 117 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 IGKV1-16P04430 117 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 HINT1P49773 126 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-201ENST00000277575 ORMDL3Q8N138 153 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 ZNF414Q96IQ9 312 aa9.22□□□□□ -0.93
USP6NL-201ENST00000277575 C1orf147Q96MC9 270 aaPredicted RBP9.22□□□□□ -0.93
USP6NL-201ENST00000277575 IGKV1-6A0A0C4DH72 117 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 CD7P09564 240 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 FBLN7Q53RD9 439 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 LHFPL4Q7Z7J7 247 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 RAB37Q96AX2 223 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 FAM215AQ9Y5M1 114 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 ZNF503-AS2A6NEH8 195 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 CIDEAO60543 219 aa9.21□□□□□ -0.93
USP6NL-201ENST00000277575 DUSP14O95147 198 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms