RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 KLF17Q5JT82 389 aaPredicted RBP9.96□□□□□ -0.81
CAPN9-201ENST00000271971 SSX7Q7RTT5 188 aa9.96□□□□□ -0.81
CAPN9-201ENST00000271971 MRPL41Q8IXM3 137 aaKnown RBP9.96□□□□□ -0.81
CAPN9-201ENST00000271971 WFDC11Q8NEX6 87 aa9.96□□□□□ -0.81
CAPN9-201ENST00000271971 RNF5Q99942 180 aa9.96□□□□□ -0.81
CAPN9-201ENST00000271971 TMEM147Q9BVK8 224 aa9.96□□□□□ -0.81
CAPN9-201ENST00000271971 VSIRQ9H7M9 311 aa9.96□□□□□ -0.81
CAPN9-201ENST00000271971 NCBP2LA6PVI3 153 aaKnown RBP9.96□□□□□ -0.82
CAPN9-201ENST00000271971 IGHV4-31P0DP07 118 aa9.96□□□□□ -0.82
CAPN9-201ENST00000271971 RNASE2P10153 161 aaKnown RBP9.96□□□□□ -0.82
CAPN9-201ENST00000271971 CD99P14209 185 aa9.96□□□□□ -0.82
CAPN9-201ENST00000271971 RPL27AP46776 148 aaKnown RBP9.96□□□□□ -0.82
CAPN9-201ENST00000271971 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.82
CAPN9-201ENST00000271971 TMEM249Q2WGJ8 235 aa9.96□□□□□ -0.82
CAPN9-201ENST00000271971 Q8N6K4 173 aa9.96□□□□□ -0.82
CAPN9-201ENST00000271971 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
CAPN9-201ENST00000271971 MANBALQ9NQG1 85 aa9.96□□□□□ -0.82
CAPN9-201ENST00000271971 MXRA5Q9NR99 2828 aa9.96□□□□□ -0.82
CAPN9-201ENST00000271971 NDUFA3O95167 84 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 AREGP15514 252 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 PSMB3P49720 205 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 FGF8P55075 233 aaPredicted RBP9.95□□□□□ -0.82
CAPN9-201ENST00000271971 ELLP55199 621 aaPredicted RBP9.95□□□□□ -0.82
CAPN9-201ENST00000271971 KCNIP4Q6PIL6 250 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 NPBQ8NG41 125 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 NAGKQ9UJ70 344 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 IGLC7A0M8Q6 106 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
CAPN9-201ENST00000271971 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 SRSF12Q8WXF0 261 aaKnown RBP9.95□□□□□ -0.82
CAPN9-201ENST00000271971 TAF15Q92804 592 aaKnown RBP eCLIP9.95□□□□□ -0.82
CAPN9-201ENST00000271971 C20orf144Q9BQM9 153 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 FAM103A1Q9BTL3 118 aaKnown RBP9.95□□□□□ -0.82
CAPN9-201ENST00000271971 SLC39A9Q9NUM3 307 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 FUT9Q9Y231 359 aa9.95□□□□□ -0.82
CAPN9-201ENST00000271971 A0A1W2PN81 502 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 CHRNA7P36544 502 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 EBI3Q14213 229 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 TMEM37Q8WXS4 190 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 TEX22C9J3V5 150 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 CNIH1O95406 144 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 FAM106CPP0CH98 169 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 BRS3P32247 399 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 RPL15P61313 204 aaKnown RBP9.94□□□□□ -0.82
CAPN9-201ENST00000271971 ERHP84090 104 aaKnown RBP9.94□□□□□ -0.82
CAPN9-201ENST00000271971 ATP6V1FQ16864 119 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 VWC2Q2TAL6 325 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 ARSJQ5FYB0 599 aaPredicted RBP9.94□□□□□ -0.82
CAPN9-201ENST00000271971 CIARTQ8N365 385 aaPredicted RBP9.94□□□□□ -0.82
CAPN9-201ENST00000271971 PARLQ9H300 379 aa9.94□□□□□ -0.82
CAPN9-201ENST00000271971 ACANP16112 2415 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 GATA3P23771 443 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 NDPQ00604 133 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 MLANAQ16655 118 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 C2orf83Q53S99 150 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 PRSS57Q6UWY2 283 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 NECAP1Q8NC96 275 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 SSMEM1Q8WWF3 244 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 SONP18583 2426 aaKnown RBP9.93□□□□□ -0.82
CAPN9-201ENST00000271971 A0A1W2PPQ1 181 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 SCGB1D1O95968 90 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
CAPN9-201ENST00000271971 RANP62826 216 aaKnown RBP9.93□□□□□ -0.82
CAPN9-201ENST00000271971 TMEM144Q7Z5S9 345 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 C22orf15Q8WYQ4 148 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 ELOVL1Q9BW60 279 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 NPCDR1Q9BY65 106 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 NOTCH2Q04721 2471 aa9.93□□□□□ -0.82
CAPN9-201ENST00000271971 MYO9AB2RTY4 2548 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 MDFIC2A0A1B0GVS7 189 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 SH2D7A6NKC9 451 aaPredicted RBP9.92□□□□□ -0.82
CAPN9-201ENST00000271971 INS-IGF2F8WCM5 200 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 IGHV3-48P01763 117 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 RPP25LQ8N5L8 163 aaKnown RBP9.92□□□□□ -0.82
CAPN9-201ENST00000271971 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 MFAP2P55001 183 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 FOXL1Q12952 345 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 FXYD3Q14802 87 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 Q8N9W7 124 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 RPUSD4Q96CM3 377 aaKnown RBP9.92□□□□□ -0.82
CAPN9-201ENST00000271971 MIEN1Q9BRT3 115 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 WDR83OSQ9Y284 106 aa9.92□□□□□ -0.82
CAPN9-201ENST00000271971 SMAD7O15105 426 aaKnown RBP9.91□□□□□ -0.82
CAPN9-201ENST00000271971 ESDP10768 282 aa9.91□□□□□ -0.82
CAPN9-201ENST00000271971 PAFAH1B2P68402 229 aa9.91□□□□□ -0.82
CAPN9-201ENST00000271971 PIFOQ8TCI5 191 aa9.91□□□□□ -0.82
CAPN9-201ENST00000271971 MS4A10Q96PG2 267 aa9.91□□□□□ -0.82
CAPN9-201ENST00000271971 CX3CL1P78423 397 aa9.9□□□□□ -0.82
CAPN9-201ENST00000271971 DMRTA1Q5VZB9 504 aa9.9□□□□□ -0.82
CAPN9-201ENST00000271971 ACSM6Q6P461 480 aa9.9□□□□□ -0.82
CAPN9-201ENST00000271971 TEX43Q6ZNM6 134 aa9.9□□□□□ -0.82
CAPN9-201ENST00000271971 BCL6BQ8N143 479 aaPredicted RBP9.9□□□□□ -0.82
CAPN9-201ENST00000271971 MGST2Q99735 147 aa9.9□□□□□ -0.82
CAPN9-201ENST00000271971 HSPB9Q9BQS6 159 aa9.9□□□□□ -0.82
CAPN9-201ENST00000271971 FNDC4Q9H6D8 234 aaPredicted RBP9.9□□□□□ -0.82
CAPN9-201ENST00000271971 IGHV3-21A0A0B4J1V1 117 aa9.9□□□□□ -0.82
CAPN9-201ENST00000271971 DEFA4P12838 97 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms