RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ZNF705BP0CI00 300 aaPredicted RBP6.38□□□□□ -1.39
TPM3-201ENST00000271850 HLA-DRB4P13762 266 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 OR10J1P30954 320 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 SUB1P53999 127 aaKnown RBP eCLIP6.38□□□□□ -1.39
TPM3-201ENST00000271850 YPEL3P61236 119 aaPredicted RBP6.38□□□□□ -1.39
TPM3-201ENST00000271850 ZNF709Q8N972 641 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 TMEM229BQ8NBD8 167 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 NPIPB3Q92617 1050 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 WDR12Q9GZL7 423 aaKnown RBP6.38□□□□□ -1.39
TPM3-201ENST00000271850 NAA60Q9H7X0 242 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 COPZ2Q9P299 210 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 CACNG5Q9UF02 275 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 HLA-DRB4X5D2U9 266 aa6.38□□□□□ -1.39
TPM3-201ENST00000271850 NACAE9PAV3 2078 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 TEX13DA0A0J9YY54 714 aaPredicted RBP6.37□□□□□ -1.39
TPM3-201ENST00000271850 CRYM-AS1A6NIL9 109 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 FAM25AB3EWG3 89 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 FAM25CB3EWG5 89 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 FAM25GB3EWG6 89 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 M0R2N4 97 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 TNFAIP8O95379 198 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 RAB3DO95716 219 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 TOMM40O96008 361 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 TBPP20226 339 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 HTR2BP41595 481 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 RORCP51449 518 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 FXYD7P58549 80 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 SCGB2B2Q4G0G5 96 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 NMSQ5H8A3 153 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 STEAP1BQ6NZ63 245 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 Q6ZR54 194 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 LINC00336Q6ZUF6 198 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 POM121L12Q8N7R1 296 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 SLC24A4Q8NFF2 622 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 RBPMSQ93062 196 aaKnown RBP6.37□□□□□ -1.39
TPM3-201ENST00000271850 PDCD10Q9BUL8 212 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 NRN1Q9NPD7 142 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 GPR132Q9UNW8 380 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 TMEM56-RWDD3S4R434 201 aa6.37□□□□□ -1.39
TPM3-201ENST00000271850 TRAV30A0A087WSZ9 112 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 PRSS29PA6NIE9 313 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 CTDSP2O14595 271 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 PSG1P11464 419 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 HOXA5P20719 270 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 TAS2R19P59542 299 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 SUPT4H1P63272 117 aaKnown RBP6.36□□□□□ -1.39
TPM3-201ENST00000271850 TMEM268Q5VZI3 342 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 SIGLEC15Q6ZMC9 328 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 FAM219AQ8IW50 185 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 CCDC71LQ8N9Z2 235 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 OR51G1Q8NGK1 321 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 OR4C16Q8NGL9 310 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 ZFAND1Q8TCF1 268 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 RNASEH2CQ8TDP1 164 aaKnown RBP6.36□□□□□ -1.39
TPM3-201ENST00000271850 RRNAD1Q96FB5 475 aaKnown RBP6.36□□□□□ -1.39
TPM3-201ENST00000271850 NEU1Q99519 415 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 ENY2Q9NPA8 101 aa6.36□□□□□ -1.39
TPM3-201ENST00000271850 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.36□□□□□ -1.39
TPM3-201ENST00000271850 IGKV1OR2-108A0A075B7D4 117 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 RPS10-NUDT3A0A1W2PQS6 291 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 F6UB75 175 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 GABARAPH6UMI1 98 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 PRM2P04554 102 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 SLC25A4P12235 298 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 ZNF182P17025 639 aaPredicted RBP6.35□□□□□ -1.39
TPM3-201ENST00000271850 NPY1RP25929 384 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 NKX2-1P43699 371 aaPredicted RBP6.35□□□□□ -1.39
TPM3-201ENST00000271850 ZNF90Q03938 601 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 SPCS2Q15005 226 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 ZNF79Q15937 498 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 GPR107Q5VW38 600 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 ZNF575Q86XF7 245 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 C1orf158Q8N1D5 194 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 Q8WTZ3 238 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 ACY3Q96HD9 319 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 C20orf173Q96LM9 149 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 SLC35B3Q9H1N7 401 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 SAV1Q9H4B6 383 aaPredicted RBP6.35□□□□□ -1.39
TPM3-201ENST00000271850 SEPSECSQ9HD40 501 aaKnown RBP6.35□□□□□ -1.39
TPM3-201ENST00000271850 HEYLQ9NQ87 328 aaPredicted RBP6.35□□□□□ -1.39
TPM3-201ENST00000271850 DKK2Q9UBU2 259 aa6.35□□□□□ -1.39
TPM3-201ENST00000271850 IGLV2-18A0A075B6J9 118 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 CEBPZOSA8MTT3 80 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 B3GALNT1O75752 331 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 ATG12O94817 140 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 RD3LP0DJH9 198 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 EMP1P54849 157 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 GAMTQ14353 236 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 LGALS9BQ3B8N2 356 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 FAM222AQ5U5X8 452 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 RNASE11Q8TAA1 199 aaKnown RBP6.34□□□□□ -1.39
TPM3-201ENST00000271850 SMIM4Q8WVI0 70 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 NDUFAF3Q9BU61 184 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 RBKSQ9H477 322 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 VCX3AQ9NNX9 186 aa6.34□□□□□ -1.39
TPM3-201ENST00000271850 HSPB7Q9UBY9 170 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms