RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 OVOL1O14753 267 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 COQ2Q96H96 371 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 CHCHD5Q9BSY4 110 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 SOCS3O14543 225 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 ICAM4Q14773 271 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
PRDM16-201ENST00000270722 RMI2Q96E14 147 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 TMEM243Q9BU79 118 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 C17orf100A8MU93 164 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 ZNHIT1O43257 154 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 SNAI2O43623 268 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 TAX1BP3O14907 124 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 TEX45Q8NA69 505 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
PRDM16-201ENST00000270722 COLCA1Q6ZS62 124 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 SLC25A45Q8N413 288 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 NCOA6Q14686 2063 aaPredicted RBP11.15□□□□□ -0.62
PRDM16-201ENST00000270722 IGHMP01871 453 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 ACP7Q6ZNF0 438 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 A0A1W2PPV9 198 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 AMBPP02760 352 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 CD7P09564 240 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 SCTP09683 121 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 ZNF826PQ6ZT77 177 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 LINC01560Q8TB33 94 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 TNFRSF12AQ9NP84 129 aa11.15□□□□□ -0.62
PRDM16-201ENST00000270722 IFI27L2Q9H2X8 130 aa11.15□□□□□ -0.63
PRDM16-201ENST00000270722 CD33P20138 364 aa11.15□□□□□ -0.63
PRDM16-201ENST00000270722 GATA3P23771 443 aa11.15□□□□□ -0.63
PRDM16-201ENST00000270722 SIPA1L3O60292 1781 aaPredicted RBP11.14□□□□□ -0.63
PRDM16-201ENST00000270722 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
PRDM16-201ENST00000270722 TEX38Q6PEX7 206 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 TRAV14DV4A0A0A6YYC5 116 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 B4DSR2 109 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 NCR2O95944 276 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 Q96M66 194 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 C15orf61A6NNL5 157 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 ATP5EP56381 51 aaPredicted RBP11.14□□□□□ -0.63
PRDM16-201ENST00000270722 KLF17Q5JT82 389 aaPredicted RBP11.14□□□□□ -0.63
PRDM16-201ENST00000270722 MUC21A0A0G2JKD1 596 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 MUC21A0A140T8X8 626 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 FAM240AA0A1B0GVK7 77 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 PRSS23O95084 383 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 IL18BPO95998 194 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
PRDM16-201ENST00000270722 SRSF1Q07955 248 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRDM16-201ENST00000270722 MUC21Q5SSG8 566 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 Q71RC1 249 aaPredicted RBP11.14□□□□□ -0.63
PRDM16-201ENST00000270722 UBE2E2Q96LR5 201 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 ZNF79Q15937 498 aa11.14□□□□□ -0.63
PRDM16-201ENST00000270722 SYNJ2BPP57105 145 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 CDCP2Q5VXM1 449 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 A0A1B0GTL3 188 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 MMP23AO75900 390 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 NPSP0C0P6 89 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
PRDM16-201ENST00000270722 DEFB121Q5J5C9 76 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 STRCP1A6NGW2 1772 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 AQP3Q92482 292 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 PTH2Q96A98 100 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 RPL36AP83881 106 aaKnown RBP11.13□□□□□ -0.63
PRDM16-201ENST00000270722 RPL36ALQ969Q0 106 aaKnown RBP11.13□□□□□ -0.63
PRDM16-201ENST00000270722 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 FAM89BQ8N5H3 189 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 FOXA2Q9Y261 457 aaPredicted RBP11.13□□□□□ -0.63
PRDM16-201ENST00000270722 GCHFRP30047 84 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 C2orf68Q2NKX9 166 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 PPP1R32Q7Z5V6 425 aa11.13□□□□□ -0.63
PRDM16-201ENST00000270722 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 C18orf15Q96N68 181 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 RETNQ9HD89 108 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 MESP2Q0VG99 397 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 ACTL10Q5JWF8 245 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 MRPS18BQ9Y676 258 aaKnown RBP11.12□□□□□ -0.63
PRDM16-201ENST00000270722 HRKO00198 91 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 PLXNA2O75051 1894 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 RUNX1Q01196 453 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 MINOS1Q5TGZ0 78 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 OTORQ9NRC9 128 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 MINOS1-NBL1R4GNA1 71 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 ZNF236Q9UL36 1845 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 TRBV5-5A0A0J9YX44 114 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 REG1AP05451 166 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 PLXND1Q9Y4D7 1925 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 THBDP07204 575 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 GZMBP10144 247 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 HERV-K104P63124 156 aa11.12□□□□□ -0.63
PRDM16-201ENST00000270722 RALGAPA2Q2PPJ7 1873 aa11.11□□□□□ -0.63
PRDM16-201ENST00000270722 A0A1W2PRX2 142 aa11.11□□□□□ -0.63
PRDM16-201ENST00000270722 C9JAW5 83 aa11.11□□□□□ -0.63
PRDM16-201ENST00000270722 CLEC19AQ6UXS0 136 aa11.11□□□□□ -0.63
PRDM16-201ENST00000270722 SBF1O95248 1867 aa11.11□□□□□ -0.63
PRDM16-201ENST00000270722 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
PRDM16-201ENST00000270722 SHANK3Q9BYB0 1731 aa11.11□□□□□ -0.63
PRDM16-201ENST00000270722 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms