RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 VSIRQ9H7M9 311 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 LMO1P25800 156 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 EMP1P54849 157 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
NPC1-201ENST00000269228 Q96MF0 132 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 GPR61Q9BZJ8 451 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 IGLV3-9A0A075B6K5 115 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 HBBP68871 147 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 SPRY4Q9C004 299 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 PSG1P11464 419 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 CBLN1P23435 193 aa11.19□□□□□ -0.62
NPC1-201ENST00000269228 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
NPC1-201ENST00000269228 C1orf147Q96MC9 270 aaPredicted RBP11.19□□□□□ -0.62
NPC1-201ENST00000269228 FOXA3P55318 350 aaPredicted RBP11.18□□□□□ -0.62
NPC1-201ENST00000269228 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.62
NPC1-201ENST00000269228 GGTLC1Q9BX51 225 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 COL4A3Q01955 1670 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 C19orf54Q5BKX5 351 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 DMRT1Q9Y5R6 373 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
NPC1-201ENST00000269228 NCOR2Q9Y618 2525 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 TAS2R60P59551 318 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 STHQ8IWL8 128 aa11.18□□□□□ -0.62
NPC1-201ENST00000269228 A0A0G2JRQ6 117 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 CIDEAO60543 219 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 LEPROTL1O95214 131 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 CD33P20138 364 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 RPL15P61313 204 aaKnown RBP11.17□□□□□ -0.62
NPC1-201ENST00000269228 RNF138Q8WVD3 245 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 IGKV3OR2-268A0A0C4DH90 116 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 OR4C46A6NHA9 309 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 LOXP28300 417 aaPredicted RBP11.17□□□□□ -0.62
NPC1-201ENST00000269228 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
NPC1-201ENST00000269228 IFITM10A6NMD0 228 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 AREGP15514 252 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 UBE2E1P51965 193 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 KIR2DL4Q99706 377 aa11.17□□□□□ -0.62
NPC1-201ENST00000269228 RPP21Q9H633 154 aaKnown RBP11.17□□□□□ -0.62
NPC1-201ENST00000269228 E9PQ18 207 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 NMUP48645 174 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 ERVK11-1P61568 191 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 CCL20P78556 96 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 Q6ZRM9 215 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 ZFP30Q9Y2G7 519 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 TMEM14EPQ6UXP3 125 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 A0A1W2PRE2 83 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 ZNF324O75467 553 aaPredicted RBP11.16□□□□□ -0.62
NPC1-201ENST00000269228 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 DKK4Q9UBT3 224 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 CRXO43186 299 aaPredicted RBP11.16□□□□□ -0.62
NPC1-201ENST00000269228 CFPP27918 469 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 SIGLEC15Q6ZMC9 328 aa11.16□□□□□ -0.62
NPC1-201ENST00000269228 M0R3E3 92 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 NDUFS7O75251 213 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 HTN3P15516 51 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 SDF2L1Q9HCN8 221 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 ANKHD1Q8IWZ3 2542 aaKnown RBP11.15□□□□□ -0.62
NPC1-201ENST00000269228 PMS2P5A8MQ11 134 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 FABP5P3A8MUU1 101 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 SAP30O75446 220 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 SOD3P08294 240 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 GATA3P23771 443 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 BEND2Q8NDZ0 799 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 BEX4Q9NWD9 120 aaPredicted RBP11.15□□□□□ -0.62
NPC1-201ENST00000269228 PSMG4Q5JS54 123 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 SCRT1Q9BWW7 348 aa11.15□□□□□ -0.62
NPC1-201ENST00000269228 RNASE7Q9H1E1 156 aaKnown RBP11.15□□□□□ -0.62
NPC1-201ENST00000269228 FBLN7Q53RD9 439 aa11.15□□□□□ -0.63
NPC1-201ENST00000269228 FER1L6-AS1Q8NA97 138 aa11.15□□□□□ -0.63
NPC1-201ENST00000269228 TRBV9A0A0B4J1U6 114 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 IGHV2-70DA0A0C4DH43 119 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 COL5A1-AS1Q5SY13 56 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 PSG8Q9UQ74 426 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 CD7P09564 240 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 PAX1P15863 534 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 PTPN13Q12923 2485 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 MGST2Q99735 147 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 CARHSP1Q9Y2V2 147 aaKnown RBP11.14□□□□□ -0.63
NPC1-201ENST00000269228 IGHV1-69DA0A0B4J2H0 117 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 ITGB1BP1O14713 200 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 IGHV1-69P01742 117 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 OBSL1O75147 1896 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 TRGV2A0A075B6R0 118 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
NPC1-201ENST00000269228 DUSP14O95147 198 aaKnown RBP11.14□□□□□ -0.63
NPC1-201ENST00000269228 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
NPC1-201ENST00000269228 NDPQ00604 133 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms