RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 IGKV1D-37A0A075B6S9 117 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 DLL1O00548 723 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 OR5B3Q8NH48 314 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 ZNF714Q96N38 554 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 CUL9Q8IWT3 2517 aa13.52□□□□□ -0.24
SQLE-201ENST00000265896 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.24
SQLE-201ENST00000265896 IGLC2P0DOY2 106 aa13.52□□□□□ -0.24
SQLE-201ENST00000265896 IGLC3P0DOY3 106 aa13.52□□□□□ -0.24
SQLE-201ENST00000265896 TBR1Q16650 682 aa13.52□□□□□ -0.24
SQLE-201ENST00000265896 ADTRPQ96IZ2 230 aa13.52□□□□□ -0.24
SQLE-201ENST00000265896 CFHR2P36980 270 aa13.52□□□□□ -0.25
SQLE-201ENST00000265896 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
SQLE-201ENST00000265896 IGLV3-9A0A075B6K5 115 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 A0A1W2PRE2 83 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 PSMB11A5LHX3 300 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 SNAI2O43623 268 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 NDUFB8O95169 186 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 HLA-DQA1P01909 254 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 ESDP10768 282 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 EXOC3-AS1Q8N2X6 119 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 FXYD5Q96DB9 178 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 TNFRSF19Q9NS68 423 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 ZNF257Q9Y2Q1 563 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 MBD3L4A6NDZ8 208 aaPredicted RBP13.51□□□□□ -0.25
SQLE-201ENST00000265896 MBD3L3A6NE82 208 aaPredicted RBP13.51□□□□□ -0.25
SQLE-201ENST00000265896 MBD3L5A6NJ08 208 aaPredicted RBP13.51□□□□□ -0.25
SQLE-201ENST00000265896 TNFSF4P23510 183 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 BSPH1Q075Z2 132 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 CIARTQ8N365 385 aaPredicted RBP13.51□□□□□ -0.25
SQLE-201ENST00000265896 OR4B1Q8NGF8 309 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 MBD3L2Q8NHZ7 208 aaPredicted RBP13.51□□□□□ -0.25
SQLE-201ENST00000265896 ZC2HC1AQ96GY0 325 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 CUBNO60494 3623 aa13.51□□□□□ -0.25
SQLE-201ENST00000265896 hDV102S1A0JD36 115 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 COX7A1P24310 79 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 CTRLP40313 264 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 PRRX1P54821 245 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 PDPNQ86YL7 162 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 LAMTOR2Q9Y2Q5 125 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 CTSZQ9UBR2 303 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 BET1LQ9NYM9 111 aa13.5□□□□□ -0.25
SQLE-201ENST00000265896 FAM181BA6NEQ2 426 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 MT-ND6P03923 174 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 IGLL1P15814 213 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 LYZP61626 148 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 COL5A1-AS1Q5SY13 56 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.49□□□□□ -0.25
SQLE-201ENST00000265896 ARL2-SNX15V9GYD0 113 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 VPS13CQ709C8 3753 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 FXYD7P58549 80 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 ADIPOQQ15848 244 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 OR10J3Q5JRS4 329 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 FAM222BQ8WU58 562 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 LY96Q9Y6Y9 160 aa13.49□□□□□ -0.25
SQLE-201ENST00000265896 LY6HO94772 140 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 GTSF1Q8WW33 167 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 TCRBV4S1A1TA0A5B7 111 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 POU2AF1Q16633 256 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 ZNF833PQ6ZTB9 187 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 OR4C13Q8NGP0 309 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 MBD6Q96DN6 1003 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 UQCR10Q9UDW1 63 aa13.48□□□□□ -0.25
SQLE-201ENST00000265896 TRAV9-1A0A075B6T8 112 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 A0A1B0GWJ7 208 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 NKX6-3A6NJ46 265 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 M0QZK8 103 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 NBEAP1P0C6P0 100 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 LINC00312Q9Y6C7 94 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 IGHV3OR16-8A0A075B7F1 116 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 TMSB15BA0A087X1C1 80 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 KLF17Q5JT82 389 aaPredicted RBP13.47□□□□□ -0.25
SQLE-201ENST00000265896 C1orf185Q5T7R7 199 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 SSX8Q7RTT4 187 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 PRNTQ86SH4 94 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 PRSS33Q8NF86 280 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 URB1-AS1Q96HZ7 61 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 ALKBH7Q9BT30 221 aaPredicted RBP13.47□□□□□ -0.25
SQLE-201ENST00000265896 GAL3ST2Q9H3Q3 398 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 KLK10O43240 276 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 RBP4P02753 201 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 OSR1Q8TAX0 266 aaPredicted RBP13.47□□□□□ -0.25
SQLE-201ENST00000265896 EPDR1Q9UM22 224 aa13.47□□□□□ -0.25
SQLE-201ENST00000265896 PPIAL4EA0A075B759 164 aa13.46□□□□□ -0.25
SQLE-201ENST00000265896 PPIAL4DF5H284 164 aa13.46□□□□□ -0.25
SQLE-201ENST00000265896 PPIAL4FP0DN26 164 aa13.46□□□□□ -0.25
SQLE-201ENST00000265896 TSPOP30536 169 aa13.46□□□□□ -0.25
SQLE-201ENST00000265896 OR5AN1Q8NGI8 311 aa13.46□□□□□ -0.25
SQLE-201ENST00000265896 C17orf100A8MU93 164 aa13.46□□□□□ -0.26
SQLE-201ENST00000265896 CA7P43166 264 aa13.46□□□□□ -0.26
SQLE-201ENST00000265896 IGFL2Q6UWQ7 119 aa13.46□□□□□ -0.26
SQLE-201ENST00000265896 TM4SF5O14894 197 aa13.45□□□□□ -0.26
SQLE-201ENST00000265896 IGLV2-23P01705 113 aa13.45□□□□□ -0.26
SQLE-201ENST00000265896 GATA4P43694 442 aa13.45□□□□□ -0.26
SQLE-201ENST00000265896 BPIFB3P59826 476 aa13.45□□□□□ -0.26
SQLE-201ENST00000265896 GOLT1AQ6ZVE7 132 aa13.45□□□□□ -0.26
SQLE-201ENST00000265896 FBXL15Q9H469 300 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms