RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 FAM27BQ5VT28 67 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 COLCA1Q6ZS62 124 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 WIPF2Q8TF74 440 aaPredicted RBP7.15□□□□□ -1.26
VAPB-201ENST00000265619 IDI2-AS1Q9NZ38 188 aa7.15□□□□□ -1.26
VAPB-201ENST00000265619 A0A0J9YW62 118 aa7.15□□□□□ -1.27
VAPB-201ENST00000265619 PPIFP30405 207 aaKnown RBP7.15□□□□□ -1.27
VAPB-201ENST00000265619 FHL3Q13643 280 aa7.15□□□□□ -1.27
VAPB-201ENST00000265619 TXNDC17Q9BRA2 123 aa7.15□□□□□ -1.27
VAPB-201ENST00000265619 COL25A1Q9BXS0 654 aaPredicted RBP7.15□□□□□ -1.27
VAPB-201ENST00000265619 ZNF883P0CG24 379 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 AREGP15514 252 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 FXYD2P54710 66 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 ATP5J2P56134 94 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 LINC01545Q5VT33 79 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 LINC00322Q6ZN03 302 aaPredicted RBP7.14□□□□□ -1.27
VAPB-201ENST00000265619 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 A0A096LPE4 126 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 A0A1W2PPZ6 126 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 FNDC10F2Z333 226 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 PRB4P10163 310 aaPredicted RBP7.14□□□□□ -1.27
VAPB-201ENST00000265619 ID1P41134 155 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 TCTEX1D4Q5JR98 221 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 AMTNQ6UX39 209 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 OR5A1Q8NGJ0 315 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 ZNF257Q9Y2Q1 563 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 TRAV5A0A0B4J249 113 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 MYOD1P15172 320 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 EIF4EBP1Q13541 118 aaPredicted RBP7.14□□□□□ -1.27
VAPB-201ENST00000265619 H2BFWTQ7Z2G1 175 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 Q8TCH9 128 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 HARBI1Q96MB7 349 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 SRXN1Q9BYN0 137 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 LINC00470Q9BZP3 86 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 MS4A6AQ9H2W1 248 aa7.14□□□□□ -1.27
VAPB-201ENST00000265619 BOKQ9UMX3 212 aaPredicted RBP7.14□□□□□ -1.27
VAPB-201ENST00000265619 ARFGEF3Q5TH69 2177 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 A0A1B0GXF2 115 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 A6NDN8 102 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 CHEK1O14757 476 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 WISP2O76076 250 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 IGHV3-7P01780 117 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 LOXL1Q08397 574 aaPredicted RBP7.13□□□□□ -1.27
VAPB-201ENST00000265619 COX19Q49B96 90 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 SLC25A53Q5H9E4 307 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 TIMM23BQ5SRD1 257 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FOXI2Q6ZQN5 318 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 TNCP24821 2201 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 MT-ATP8P03928 68 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FABP2P12104 132 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 WT1P19544 449 aaPredicted RBP7.13□□□□□ -1.27
VAPB-201ENST00000265619 DSCR4P56555 118 aaPredicted RBP7.13□□□□□ -1.27
VAPB-201ENST00000265619 KRTAP27-1Q3LI81 207 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 TRIB1Q96RU8 372 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 OBP2BQ9NPH6 170 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 TRAPPC2LQ9UL33 140 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 IGHV3-43A0A0B4J1X8 118 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A10PA6NDY2 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A18PA6NE21 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A16PA6NEW6 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A20PA6NIJ5 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A8PA6NJQ4 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A7PA6NKC0 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A22PA8MWA6 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A12PA8MX19 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A5PA8MXJ8 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 DEFB108AA8MXU0 73 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A23PA8MXZ1 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 H3BMG7 143 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A15PP0C7V4 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A13PP0C7W8 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A14PP0C7W9 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM90A24PP0C7X0 464 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 IGHV3-43DP0DP04 118 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 TEPPQ6URK8 271 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 OR10D3Q8NH80 312 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 OR2H1Q9GZK4 316 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 FAM234AQ9H0X4 552 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 PROK2Q9HC23 129 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
VAPB-201ENST00000265619 DUSP13Q9UII6 198 aa7.13□□□□□ -1.27
VAPB-201ENST00000265619 NGFP01138 241 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 RTL8BQ17RB0 113 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 ASCL5Q7RTU5 278 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 GTSF1Q8WW33 167 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 HSD17B10Q99714 261 aaKnown RBP7.12□□□□□ -1.27
VAPB-201ENST00000265619 RAB1BQ9H0U4 201 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 MGST3O14880 152 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 MEOX1P50221 254 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 ANXA2RQ3ZCQ2 193 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 Q6P435 159 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 INO80CQ6PI98 192 aaPredicted RBP7.12□□□□□ -1.27
VAPB-201ENST00000265619 ABCA4P78363 2273 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 IGKV1OR2-108A0A075B7D4 117 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 TRBV6-6A0A0A6YYG2 114 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 KBTBD11-OT1A0A1B0GTJ5 212 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 ZNF503-AS2A6NEH8 195 aa7.12□□□□□ -1.27
VAPB-201ENST00000265619 TNFRSF13BO14836 293 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms