RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 A0A1W2PRD5 423 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 A0A1W2PRF3 423 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 A0A1W2PRM7 423 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 DOT1LQ8TEK3 1739 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 NWD2Q9ULI1 1742 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 PCNX1Q96RV3 2341 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 IGHV5-10-1A0A0J9YXX1 117 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 AGFG2O95081 481 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 ATP5J2P56134 94 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 GTSCR1Q86UQ5 136 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 ITLN2Q8WWU7 325 aaPredicted RBP4.55□□□□□ -1.68
XRN1-201ENST00000264951 GBF1Q92538 1859 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 TRAV8-3A0A0A6YYJ7 113 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 DSCR9P59020 149 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 TFF3Q07654 80 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 STPG4Q8N801 248 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 ZNF501Q96CX3 271 aaPredicted RBP4.55□□□□□ -1.68
XRN1-201ENST00000264951 TGFAP01135 160 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 C3orf79P0CE67 100 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 CEACAM8P31997 349 aaPredicted RBP4.55□□□□□ -1.68
XRN1-201ENST00000264951 CDKN1BP46527 198 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 C9orf50Q5SZB4 431 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 SUMO4Q6EEV6 95 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 TRPT1Q86TN4 253 aaKnown RBP4.55□□□□□ -1.68
XRN1-201ENST00000264951 NPC2P61916 151 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 TGIF1Q15583 401 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.55□□□□□ -1.68
XRN1-201ENST00000264951 Q6ZS49 121 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 PRO1854Q9UHT4 67 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 PKD1L3Q7Z443 1732 aa4.55□□□□□ -1.68
XRN1-201ENST00000264951 MSGN1A6NI15 193 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 SHISA9B4DS77 424 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 IGHG3P01860 377 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 TCRAP04437 139 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 MRAPQ8TCY5 172 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 IGHV1-45A0A0A0MS14 117 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 TRBV7-1A0A0A6YYK4 115 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 LDLRAD4O15165 306 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 INSP01308 110 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 SYNJ2BPP57105 145 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 MINOS1Q5TGZ0 78 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 GLMPQ8WWB7 406 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 C1orf43Q9BWL3 253 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 MINOS1-NBL1R4GNA1 71 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 NDUFB8O95169 186 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 SIGLEC15Q6ZMC9 328 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 RNF126Q9BV68 326 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 PLAC1Q9HBJ0 212 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 NRAPQ86VF7 1730 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 ZGRF1Q86YA3 2104 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 TRBV6-6A0A0A6YYG2 114 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 D6R8Y8 96 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 ZPLD1Q8TCW7 415 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 INS-IGF2F8WCM5 200 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 HOXB3P14651 431 aaPredicted RBP4.54□□□□□ -1.68
XRN1-201ENST00000264951 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 MUC21A0A0G2JKD1 596 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 MUC21A0A140T8X8 626 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 PSG1P11464 419 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 MUC21Q5SSG8 566 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 RNF166Q96A37 237 aaPredicted RBP4.54□□□□□ -1.68
XRN1-201ENST00000264951 TMEM133Q9H2Q1 129 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 A0A1B0GWJ7 208 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 C2CD4DB7Z1M9 353 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 FUSP35637 526 aaKnown RBP eCLIP4.54□□□□□ -1.68
XRN1-201ENST00000264951 TMEM14EPQ6UXP3 125 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 KIAA1217Q5T5P2 1943 aa4.54□□□□□ -1.68
XRN1-201ENST00000264951 GREM1O60565 184 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 SLC25A16P16260 332 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 FOXC1Q12948 553 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 LGALS9BQ3B8N2 356 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 LGALS9CQ6DKI2 356 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 ZNF497Q6ZNH5 498 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 FAM231DQ6ZW35 169 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 TMEM52Q8NDY8 209 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 HCSTQ9UBK5 93 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 TUBGCP6Q96RT7 1819 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 IGHV3-72A0A0B4J1Y9 119 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 CCL3L1P16619 93 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 PAX8Q06710 450 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 ZAR1Q86SH2 424 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 A0A0G2JK05 382 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 C17orf98A8MV24 154 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 H0YGX0 51 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 TIMM23O14925 209 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 COX8AP10176 69 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 Q5BKY6 102 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 ZNF784Q8NCA9 323 aaPredicted RBP4.53□□□□□ -1.68
XRN1-201ENST00000264951 F6UB75 175 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 MRPL55Q7Z7F7 128 aaKnown RBP4.53□□□□□ -1.68
XRN1-201ENST00000264951 NCR2O95944 276 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 FOXG1P55316 489 aaPredicted RBP4.53□□□□□ -1.68
XRN1-201ENST00000264951 FOXL2P58012 376 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 IGFBPL1Q8WX77 278 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 LIME1Q9H400 295 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 COL22A1Q8NFW1 1626 aaPredicted RBP4.53□□□□□ -1.68
XRN1-201ENST00000264951 IGKV1D-33P01593 117 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 IGKV1-33P01594 117 aa4.53□□□□□ -1.68
XRN1-201ENST00000264951 COL9A2Q14055 689 aaPredicted RBP4.53□□□□□ -1.68
XRN1-201ENST00000264951 LY6G6FQ5SQ64 297 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms