RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 EIF4EBP1Q13541 118 aaPredicted RBP13.32□□□□□ -0.28
CTCF-201ENST00000264010 K7ENP7 123 aa13.32□□□□□ -0.28
CTCF-201ENST00000264010 SELENOTP62341 195 aa13.32□□□□□ -0.28
CTCF-201ENST00000264010 BRWD1-AS2P59051 145 aa13.31□□□□□ -0.28
CTCF-201ENST00000264010 LGALS4P56470 323 aa13.31□□□□□ -0.28
CTCF-201ENST00000264010 TMEM14BQ9NUH8 114 aa13.31□□□□□ -0.28
CTCF-201ENST00000264010 THYN1Q9P016 225 aa13.31□□□□□ -0.28
CTCF-201ENST00000264010 PRSS1P07477 247 aa13.31□□□□□ -0.28
CTCF-201ENST00000264010 RPL27AP46776 148 aaKnown RBP13.31□□□□□ -0.28
CTCF-201ENST00000264010 VWC2Q2TAL6 325 aa13.31□□□□□ -0.28
CTCF-201ENST00000264010 PRR30Q53SZ7 412 aaPredicted RBP13.31□□□□□ -0.28
CTCF-201ENST00000264010 ORAOV1Q8WV07 137 aa13.31□□□□□ -0.28
CTCF-201ENST00000264010 A0A087X0K7 114 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 MUC21A0A0G2JKD1 596 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 MUC21A0A140T8X8 626 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 STAG3L2P0CL84 134 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 STAG3L3P0CL85 134 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 KLRB1Q12918 225 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 PRSS8Q16651 343 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 MUC21Q5SSG8 566 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 OR4A5Q8NH83 315 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 ARFGEF3Q5TH69 2177 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 CACNG8Q8WXS5 425 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 YTHDF2Q9Y5A9 579 aaKnown RBP13.3□□□□□ -0.28
CTCF-201ENST00000264010 PMS2P5A8MQ11 134 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 MMP23AO75900 390 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 CDKN1BP46527 198 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 GAGE1Q13065 139 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 HIF1ANQ9NWT6 349 aa13.3□□□□□ -0.28
CTCF-201ENST00000264010 LINC00869P0C866 280 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 MYOD1P15172 320 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 EFNB3Q15768 340 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 C10orf113Q5VZT2 155 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 YLPM1P49750 1951 aaKnown RBP13.29□□□□□ -0.28
CTCF-201ENST00000264010 C8orf88P0DMB2 117 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 TSPOP30536 169 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 IGKV1-16P04430 117 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 MTURNQ8N3F0 131 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
CTCF-201ENST00000264010 PPIAL4CA0A0B4J2A2 164 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 SAP30O75446 220 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 PPIAL4GP0DN37 164 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 CEACAM3P40198 252 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 CLEC7AQ9BXN2 247 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 A0A1B0GWB2 263 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 E7EQL1 145 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 PROP1O75360 226 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 TGFAP01135 160 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 ORM2P19652 201 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 Q1RN00 199 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 POU2AF1Q16633 256 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 LYPD2Q6UXB3 125 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 ZNRD1Q9P1U0 126 aa13.28□□□□□ -0.28
CTCF-201ENST00000264010 TRAV30A0A087WSZ9 112 aa13.27□□□□□ -0.28
CTCF-201ENST00000264010 H0YJW9 148 aa13.27□□□□□ -0.28
CTCF-201ENST00000264010 RND2P52198 227 aa13.27□□□□□ -0.28
CTCF-201ENST00000264010 CD69Q07108 199 aa13.27□□□□□ -0.28
CTCF-201ENST00000264010 TMEM133Q9H2Q1 129 aa13.27□□□□□ -0.28
CTCF-201ENST00000264010 SCO2A0A1W2PP80 73 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 CGB3P0DN86 165 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 CGB7P0DN87 165 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 MIR17HGQ75NE6 70 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 DDB2Q92466 427 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 NPIPB3Q92617 1050 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 hDV102S1A0JD36 115 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 HCP5Q6MZN7 132 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 OR10AG1Q8NH19 301 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 NEUROG1Q92886 237 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 PERPQ96FX8 193 aa13.27□□□□□ -0.29
CTCF-201ENST00000264010 MRPL32Q9BYC8 188 aaKnown RBP13.27□□□□□ -0.29
CTCF-201ENST00000264010 FNDC10F2Z333 226 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 RNASEH2CQ8TDP1 164 aaKnown RBP13.26□□□□□ -0.29
CTCF-201ENST00000264010 TMEM70Q9BUB7 260 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 SSBP4Q9BWG4 385 aaPredicted RBP13.26□□□□□ -0.29
CTCF-201ENST00000264010 TMSB15BA0A087X1C1 80 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 HYPMO75409 117 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 SOX21Q9Y651 276 aaPredicted RBP13.26□□□□□ -0.29
CTCF-201ENST00000264010 COL27A1Q8IZC6 1860 aaPredicted RBP13.26□□□□□ -0.29
CTCF-201ENST00000264010 DSPP15924 2871 aaKnown RBP13.26□□□□□ -0.29
CTCF-201ENST00000264010 THBDP07204 575 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 FAM162BQ5T6X4 162 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 STXBP6Q8NFX7 210 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 OR1B1Q8NGR6 318 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 PAXXQ9BUH6 204 aa13.26□□□□□ -0.29
CTCF-201ENST00000264010 C3orf79P0CE67 100 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 GATA2P23769 480 aaPredicted RBP13.25□□□□□ -0.29
CTCF-201ENST00000264010 CRYBB3P26998 211 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 TMEM177Q53S58 311 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 APELAP0DMC3 54 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 LCN2P80188 198 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 IBA57Q5T440 356 aaKnown RBP13.25□□□□□ -0.29
CTCF-201ENST00000264010 WFDC3Q8IUB2 231 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 TMEM167AQ8TBQ9 72 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 GNB4Q9HAV0 340 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 LYNX1G3V0Z9 82 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 REG1AP05451 166 aa13.25□□□□□ -0.29
CTCF-201ENST00000264010 IGHV1-8P0DP01 117 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms