RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 INAFM2P0DMQ5 153 aa13.77□□□□□ -0.2
USP13-201ENST00000263966 C9orf62Q8N4C0 152 aa13.77□□□□□ -0.2
USP13-201ENST00000263966 DANCRP0C864 163 aa13.77□□□□□ -0.2
USP13-201ENST00000263966 ERG28Q9UKR5 140 aa13.77□□□□□ -0.2
USP13-201ENST00000263966 GPHA2Q96T91 129 aa13.77□□□□□ -0.2
USP13-201ENST00000263966 M0R1W7 72 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 FAM90A2PQ658T7 463 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 C9orf106Q8NAJ2 232 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 PLEKHB2Q96CS7 222 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 ZNF48Q96MX3 618 aaPredicted RBP13.77□□□□□ -0.21
USP13-201ENST00000263966 TRBV5-5A0A0J9YX44 114 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 CLPSP04118 112 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 FBLN7Q53RD9 439 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 BHLHA9Q7RTU4 235 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 TMEM219Q86XT9 240 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 LINC00477Q96M19 166 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 C1QTNF5Q9BXJ0 243 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 MRPS18AQ9NVS2 196 aaKnown RBP13.77□□□□□ -0.21
USP13-201ENST00000263966 IGLV1-36A0A0B4J1U3 117 aa13.77□□□□□ -0.21
USP13-201ENST00000263966 PSG7Q13046 419 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 C1orf100Q5SVJ3 147 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 ST6GALNAC3Q8NDV1 305 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 GAGE2EQ4V326 116 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 C5orf66Q9H5L9 145 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 GAGE2DQ9UEU5 116 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
USP13-201ENST00000263966 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 PRR14LQ5THK1 2151 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 H3BUX3 64 aa13.76□□□□□ -0.21
USP13-201ENST00000263966 IGKV1-8A0A0C4DH67 115 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 EIF4EBP2Q13542 120 aaPredicted RBP13.75□□□□□ -0.21
USP13-201ENST00000263966 FAM208BQ5VWN6 2430 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 TIMP3P35625 211 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 NRTNQ99748 197 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 GGTLC1Q9BX51 225 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 C12orf77C9JDV5 145 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 CCL1P22362 96 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 A0A0U1RRA0 63 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 TMEM187Q14656 261 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 IGHV3-64A0A075B6Q5 118 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 DEFB130BP0DP73 79 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 DEFB130AP0DP74 79 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 LIMS1P48059 325 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 C8orf82Q6P1X6 216 aaPredicted RBP13.75□□□□□ -0.21
USP13-201ENST00000263966 IGHV3-73A0A0B4J1V6 119 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 RFPL3SP0C7P2 107 aa13.75□□□□□ -0.21
USP13-201ENST00000263966 REPIN1Q9BWE0 567 aaKnown RBP13.75□□□□□ -0.21
USP13-201ENST00000263966 SRRM4A7MD48 611 aaKnown RBP13.75□□□□□ -0.21
USP13-201ENST00000263966 TIAF1O95411 115 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 NIT1Q86X76 327 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 MBNL3Q9NUK0 354 aaKnown RBP13.74□□□□□ -0.21
USP13-201ENST00000263966 OTOGLQ3ZCN5 2332 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 EVI2AP22794 236 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 C4orf48Q5BLP8 95 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 CHAC1Q9BUX1 264 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 IGKCP01834 107 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 MDKP21741 143 aaPredicted RBP13.74□□□□□ -0.21
USP13-201ENST00000263966 TRAF4Q9BUZ4 470 aaPredicted RBP13.74□□□□□ -0.21
USP13-201ENST00000263966 TNS1Q9HBL0 1735 aaKnown RBP13.74□□□□□ -0.21
USP13-201ENST00000263966 RIPPLY3P57055 190 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 CD24P25063 80 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 GFI1BQ5VTD9 330 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 LRRC37AA6NMS7 1700 aa13.74□□□□□ -0.21
USP13-201ENST00000263966 A0A0G2JK05 382 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 ZNF672Q499Z4 452 aaPredicted RBP13.73□□□□□ -0.21
USP13-201ENST00000263966 FAM90A9PA6NNJ1 464 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 J3QKU1 62 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 RND3P61587 244 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 C5orf30Q96GV9 206 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 SCO2A0A1W2PP80 73 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 VCYO14598 125 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 C1QL1O75973 258 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 LHX2P50458 406 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 FAM201AQ5SY85 155 aa13.73□□□□□ -0.21
USP13-201ENST00000263966 Q5PR19 223 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 A8MWV9 139 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 KIAA1671Q9BY89 1806 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 NDUFS5O43920 106 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 MORN2Q502X0 79 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 NHP2Q9NX24 153 aaKnown RBP13.72□□□□□ -0.21
USP13-201ENST00000263966 IGHV2-26A0A0B4J1V2 119 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 ZNF876PQ49A33 203 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 WFDC12Q8WWY7 111 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 C1orf159Q96HA4 380 aa13.72□□□□□ -0.21
USP13-201ENST00000263966 IGHV3-53P01767 116 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 CELA3AP09093 270 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 ZNF114Q8NC26 417 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 CCL3L1P16619 93 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 FBLIM1Q8WUP2 373 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 MYMXA0A1B0GTQ4 84 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 CELA3BP08861 270 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 UBE2E2Q96LR5 201 aa13.71□□□□□ -0.21
USP13-201ENST00000263966 SMPXQ9UHP9 88 aa13.71□□□□□ -0.22
USP13-201ENST00000263966 CRLF1O75462 422 aa13.71□□□□□ -0.22
USP13-201ENST00000263966 DUTP33316 252 aaKnown RBP13.71□□□□□ -0.22
USP13-201ENST00000263966 FAM110DQ8TAY7 271 aaPredicted RBP13.71□□□□□ -0.22
USP13-201ENST00000263966 H0YL77 283 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 EPDR1Q9UM22 224 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 TRBV25-1A0A075B6N4 114 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms