RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 BMPR1BO00238 502 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 TGOLN2O43493 480 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 SEC11BP0C7V7 166 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 RD3LP0DJH9 198 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 FCGR2BP31994 310 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 RPL29P47914 159 aaKnown RBP7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 B2MP61769 119 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF616Q08AN1 781 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 PATE2Q6UY27 113 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 COMMD1Q8N668 190 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 UBE2E2Q96LR5 201 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 PSMG3Q9BT73 122 aaPredicted RBP7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 PEF1Q9UBV8 284 aaKnown RBP7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 TIMM9Q9Y5J7 89 aa7.5□□□□□ -1.21
SNRNP40-201ENST00000263694 IGHV4OR15-8A0A075B7B6 117 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 TRAV30A0A087WSZ9 112 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 A0A087WW49 117 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 I3L521 148 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 NUPL2O15504 423 aaKnown RBP7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF207O43670 478 aaKnown RBP7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 TSPAN15O95858 294 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 ORM2P19652 201 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 CDX1P47902 265 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 LYZP61626 148 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 SPATA31B1PQ5VZV4 182 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 SSX7Q7RTT5 188 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 KLHL30-AS1Q8NEE0 82 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 OR51G1Q8NGK1 321 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 RCC1LQ96I51 464 aaKnown RBP7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 PBDC1Q9BVG4 233 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 RPRMQ9NS64 109 aa7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 PUS1Q9Y606 427 aaKnown RBP eCLIP7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 FBN1P35555 2871 aaKnown RBP7.49□□□□□ -1.21
SNRNP40-201ENST00000263694 NUDT19A8MXV4 375 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 HMGB3O15347 200 aaKnown RBP7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 TOMM40O96008 361 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 IFNA7P01567 189 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 IL4P05112 153 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 YPEL3P61236 119 aaPredicted RBP7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 NSUN5P1Q3KNT7 163 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 AWAT1Q58HT5 328 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 AKR1C8PQ5T2L2 129 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 MORN5Q5VZ52 161 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 TOMM20LQ6UXN7 152 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 C8orf86Q6ZUL3 223 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 OR1B1Q8NGR6 318 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 Q8WTZ3 238 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 TMEM37Q8WXS4 190 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 PHYHIPLQ96FC7 376 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 UBQLN2Q9UHD9 624 aa7.48□□□□□ -1.21
SNRNP40-201ENST00000263694 TRAV5A0A0B4J249 113 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 A0A1B0GV50 99 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 WI2-2373I1.2A0A1W2PRP0 233 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 OR5G3P0C626 314 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 SULT1A2P50226 295 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 SELENOTP62341 195 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 SERF2P84101 59 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 FOXL1Q12952 345 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 USF2Q15853 346 aaPredicted RBP7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF726P1Q15940 193 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 TMEM41BQ5BJD5 291 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 FAM122CQ6P4D5 195 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 SPSB3Q6PJ21 355 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 UNQ9165/PRO28630Q6UXU0 137 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 RPP25LQ8N5L8 163 aaKnown RBP7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 OR10G4Q8NGN3 311 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 OR10G9Q8NGN4 311 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 OR10G7Q8NGN6 311 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 FAM213BQ8TBF2 198 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 WFDC12Q8WWY7 111 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 UHRF2Q96PU4 802 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 SLC25A22Q9H936 323 aa7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 SEPSECSQ9HD40 501 aaKnown RBP7.47□□□□□ -1.21
SNRNP40-201ENST00000263694 IGHV3OR16-13A0A075B7E8 117 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 IGHV3-49A0A0A0MS15 119 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 IGHV3-74A0A0B4J1X5 117 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF320A2RRD8 509 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF705EA8MWA4 302 aaPredicted RBP7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 COX7A2P2O60397 106 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 GGCTO75223 188 aaKnown RBP7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 HSPB1P04792 205 aaKnown RBP7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 M6PRP20645 277 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 EDN2P20800 178 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 SLURP1P55000 103 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 ACOT6Q3I5F7 207 aaPredicted RBP7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 LEMD1Q68G75 181 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 EIF5AL1Q6IS14 154 aaKnown RBP7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 ZNF600Q6ZNG1 722 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 Q6ZRG5 221 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 OR11H1Q8NG94 326 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 C4orf3Q8WVX3 66 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 RNF125Q96EQ8 232 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 C20orf24Q9BUV8 137 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 C19orf24Q9BVV8 132 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 ZFAND3Q9H8U3 227 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 DNAJC4Q9NNZ3 241 aa7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 GAR1Q9NY12 217 aaKnown RBP7.46□□□□□ -1.21
SNRNP40-201ENST00000263694 TSSC4Q9Y5U2 329 aaPredicted RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms