RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 M0QZK8 103 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 CNIH1O95406 144 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 REG1AP05451 166 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 RBMY1DP0C7P1 496 aaKnown RBP10.32□□□□□ -0.76
SGCA-201ENST00000262018 ELLP55199 621 aaPredicted RBP10.32□□□□□ -0.76
SGCA-201ENST00000262018 AKR1C1Q04828 323 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 BTN1A1Q13410 526 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 GAMTQ14353 236 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 FXYD3Q14802 87 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 ZNF726P1Q15940 193 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 ZNF506Q5JVG8 444 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 ZNF562Q6V9R5 426 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 SLC16A13Q7RTY0 426 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 Q8N9W7 124 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 OR1P1Q8NH06 330 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 TUBA4BQ9H853 241 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 MOB4Q9Y3A3 225 aa10.32□□□□□ -0.76
SGCA-201ENST00000262018 F11RQ9Y624 299 aaKnown RBP10.32□□□□□ -0.76
SGCA-201ENST00000262018 NCBP2LA6PVI3 153 aaKnown RBP10.31□□□□□ -0.76
SGCA-201ENST00000262018 CORTO00230 105 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 AGPAT2O15120 278 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 RPL29P47914 159 aaKnown RBP10.31□□□□□ -0.76
SGCA-201ENST00000262018 MFAP2P55001 183 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 RAB31Q13636 194 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 MLANAQ16655 118 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 ACOT6Q3I5F7 207 aaPredicted RBP10.31□□□□□ -0.76
SGCA-201ENST00000262018 C10orf99Q6UWK7 81 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 RPP25LQ8N5L8 163 aaKnown RBP10.31□□□□□ -0.76
SGCA-201ENST00000262018 SLC35E1Q96K37 410 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 TXNDC17Q9BRA2 123 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 SCRT1Q9BWW7 348 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
SGCA-201ENST00000262018 PRELID1Q9Y255 219 aa10.31□□□□□ -0.76
SGCA-201ENST00000262018 HLA-DRB1P01911 266 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 CRYGCP07315 174 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 CTRB1P17538 263 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 ADCYAP1P18509 176 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 CX3CL1P78423 397 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 SRSF3P84103 164 aaKnown RBP10.3□□□□□ -0.76
SGCA-201ENST00000262018 CTRB2Q6GPI1 263 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 CLRN3Q8NCR9 226 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 OR10G9Q8NGN4 311 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 OR10G7Q8NGN6 311 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 SFT2D1Q8WV19 159 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 PXMP4Q9Y6I8 212 aa10.3□□□□□ -0.76
SGCA-201ENST00000262018 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 B4DEV8 164 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 SEC14L6B5MCN3 397 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 CYB5BO43169 146 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 YIF1AO95070 293 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 CCL20P78556 96 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 PRR20EP86478 221 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 PRR20CP86479 221 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 PRR20DP86480 221 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 PRR20BP86481 221 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 PRR20AP86496 221 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 PNRC1Q12796 327 aaPredicted RBP10.29□□□□□ -0.76
SGCA-201ENST00000262018 SOHLH1Q5JUK2 328 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 MIC13Q5XKP0 118 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 ETFRF1Q6IPR1 90 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 SSX7Q7RTT5 188 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 THAP8Q8NA92 274 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 ABHD5Q8WTS1 349 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 ARPC1AQ92747 370 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 ACTR3CQ9C0K3 210 aaPredicted RBP10.29□□□□□ -0.76
SGCA-201ENST00000262018 MANBALQ9NQG1 85 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 SMCO4Q9NRQ5 59 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 SLC45A2Q9UMX9 530 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 PCLOQ9Y6V0 5065 aa10.29□□□□□ -0.76
SGCA-201ENST00000262018 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 IGKV1OR2-108A0A075B7D4 117 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 IGHV7-81A0A0B4J1V7 117 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 APELAP0DMC3 54 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 NDPQ00604 133 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 C5orf56Q8N8D9 126 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 SLC39A9Q9NUM3 307 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 DMRT1Q9Y5R6 373 aa10.28□□□□□ -0.76
SGCA-201ENST00000262018 A0A1B0GV50 99 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 MAP1LC3B2A6NCE7 125 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 NPIPB5A8MRT5 1133 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 DNASE2O00115 360 aaPredicted RBP10.27□□□□□ -0.77
SGCA-201ENST00000262018 SCO1O75880 301 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 AMY1AP04745 511 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 LINC00869P0C866 280 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 EGR2P11161 476 aaPredicted RBP10.27□□□□□ -0.77
SGCA-201ENST00000262018 OR10J1P30954 320 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 PSMB3P49720 205 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 B2MP61769 119 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 ASPHD1Q5U4P2 390 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 FAM122CQ6P4D5 195 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 LCN15Q6UWW0 184 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 C19orf35Q6ZS72 473 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 SLC35E3Q7Z769 313 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 TTC9CQ8N5M4 171 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 C15orf54Q8N8G6 183 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms