RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PRNDQ9UKY0 176 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 OR2J3O76001 311 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 NBEAP1P0C6P0 100 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 FAM222BQ8WU58 562 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 C11orf52Q96A22 123 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
PRPF40B-201ENST00000261897 TRGV5A0A0B4J1U4 118 aa12.98□□□□□ -0.33
PRPF40B-201ENST00000261897 DKK1O94907 266 aa12.98□□□□□ -0.33
PRPF40B-201ENST00000261897 FOXE3Q13461 319 aa12.98□□□□□ -0.33
PRPF40B-201ENST00000261897 IFI27L2Q9H2X8 130 aa12.98□□□□□ -0.33
PRPF40B-201ENST00000261897 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
PRPF40B-201ENST00000261897 PPBPP02775 128 aa12.98□□□□□ -0.33
PRPF40B-201ENST00000261897 IDI2-AS1Q9NZ38 188 aa12.98□□□□□ -0.33
PRPF40B-201ENST00000261897 PPIAL4EA0A075B759 164 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 SLC25A17O43808 307 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 CT45A10P0DMU9 189 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 PPIAL4FP0DN26 164 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 RNF138Q8WVD3 245 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 ZNF503Q96F45 646 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 ZNF576Q9H609 170 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 CT45A1Q5HYN5 189 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 FAM71F2Q6NXP2 309 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 INO80CQ6PI98 192 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 CT45A3Q8NHU0 189 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 MALRD1Q5VYJ5 2156 aa12.97□□□□□ -0.33
PRPF40B-201ENST00000261897 NCR2O95944 276 aa12.96□□□□□ -0.33
PRPF40B-201ENST00000261897 TGFAP01135 160 aa12.96□□□□□ -0.33
PRPF40B-201ENST00000261897 SAA1P0DJI8 122 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-201ENST00000261897 TMEM164Q5U3C3 297 aa12.96□□□□□ -0.33
PRPF40B-201ENST00000261897 FAM216BQ8N7L0 139 aa12.96□□□□□ -0.33
PRPF40B-201ENST00000261897 CLUHP3Q96NS8 147 aa12.96□□□□□ -0.33
PRPF40B-201ENST00000261897 GPR82Q96P67 336 aa12.96□□□□□ -0.33
PRPF40B-201ENST00000261897 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.34
PRPF40B-201ENST00000261897 M0R296 226 aa12.96□□□□□ -0.34
PRPF40B-201ENST00000261897 ARL3P36405 182 aa12.96□□□□□ -0.34
PRPF40B-201ENST00000261897 ZCCHC24Q8N2G6 241 aaKnown RBP12.96□□□□□ -0.34
PRPF40B-201ENST00000261897 EPDR1Q9UM22 224 aa12.96□□□□□ -0.34
PRPF40B-201ENST00000261897 TEX48A0A1B0GUV7 120 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 MGST3O14880 152 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 IGLV2-8P01709 118 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 AZU1P20160 251 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 IFI27P40305 119 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 ITLN1Q8WWA0 313 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 KLRC4-KLRK1H3BQV0 150 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 ARMS2P0C7Q2 107 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 PSG3Q16557 428 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 FAM169BQ8N8A8 192 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 CFHR2P36980 270 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 CCL8P80075 99 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 AMTNQ6UX39 209 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 RBPMS2Q6ZRY4 209 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 PCP2Q8IVA1 136 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 TSSC4Q9Y5U2 329 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 LY96Q9Y6Y9 160 aa12.95□□□□□ -0.34
PRPF40B-201ENST00000261897 IGHV3-35A0A0C4DH35 117 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 IGLC1P0CG04 106 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 ERVK11-1P61568 191 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 PRR20EP86478 221 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 PRR20CP86479 221 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 PRR20DP86480 221 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 PRR20BP86481 221 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 PRR20AP86496 221 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 ZNF414Q96IQ9 312 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 J3QR89 54 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 CCL11P51671 97 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 OR1L8Q8NGR8 309 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 MAFAQ8NHW3 353 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 LINC00470Q9BZP3 86 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 SLC25A10Q9UBX3 287 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 P0C879 139 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 SAMD5Q5TGI4 173 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 SAP25Q8TEE9 199 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 JPT1Q9UK76 154 aa12.94□□□□□ -0.34
PRPF40B-201ENST00000261897 IGHV1-2P23083 117 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 PPIFP30405 207 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 ETDBQ3ZM63 59 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 ZNF257Q9Y2Q1 563 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.93□□□□□ -0.348e-6■■■■□ 21.9
PRPF40B-201ENST00000261897 CD69Q07108 199 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 ZNF329Q86UD4 541 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 BOD1L1Q8NFC6 3051 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 SRRM4A7MD48 611 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 VWC2LB2RUY7 222 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 FAM106CPP0CH98 169 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 FAM106AQ4KMX7 169 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 PET117Q6UWS5 81 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 KLK15Q9H2R5 256 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 Q9H3A6 140 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 C1RLQ9NZP8 487 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 PILRBQ9UKJ0 227 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 SIT1Q9Y3P8 196 aa12.93□□□□□ -0.34
PRPF40B-201ENST00000261897 KRTAP27-1Q3LI81 207 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms