RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 HBDP02042 147 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 OR11H1Q8NG94 326 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 OR11H2Q8NH07 326 aa10.03□□□□□ -0.8
SPG11-201ENST00000261866 SDHCQ99643 169 aaPredicted RBP10.03□□□□□ -0.8
SPG11-201ENST00000261866 DUTP33316 252 aaKnown RBP10.02□□□□□ -0.8
SPG11-201ENST00000261866 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.8
SPG11-201ENST00000261866 FAM110DQ8TAY7 271 aaPredicted RBP10.02□□□□□ -0.8
SPG11-201ENST00000261866 FNDC4Q9H6D8 234 aaPredicted RBP10.02□□□□□ -0.8
SPG11-201ENST00000261866 NPIPB5A8MRT5 1133 aa10.02□□□□□ -0.8
SPG11-201ENST00000261866 CGB3P0DN86 165 aa10.02□□□□□ -0.8
SPG11-201ENST00000261866 HIST1H4AP62805 103 aaKnown RBP10.02□□□□□ -0.81
SPG11-201ENST00000261866 TPTE2P1Q5T6R2 138 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 SPATA31B1PQ5VZV4 182 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 H3BRM9 83 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 SBF1O95248 1867 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 A0A1B0GV90 55 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 CA7P43166 264 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 ARFGEF3Q5TH69 2177 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 IGLV3-32A0A0A0MS00 114 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 FCN3O75636 299 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 VCX2Q9H322 139 aa10.02□□□□□ -0.81
SPG11-201ENST00000261866 E7EQL1 145 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 SCRT1Q9BWW7 348 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 CKS1BP61024 79 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 SLC25A39Q9BZJ4 359 aaPredicted RBP10.01□□□□□ -0.81
SPG11-201ENST00000261866 MBNL3Q9NUK0 354 aaKnown RBP10.01□□□□□ -0.81
SPG11-201ENST00000261866 SPTA1P02549 2419 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 KIAA2026Q5HYC2 2103 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 DPRXA6NFQ7 191 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 CD28P10747 220 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 PAX1P15863 534 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 CRYGSP22914 178 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 SPTBN2O15020 2390 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 DSCR9P59020 149 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 GAFA1Q96PS6 74 aa10.01□□□□□ -0.81
SPG11-201ENST00000261866 RPUSD1Q9UJJ7 312 aaKnown RBP10.01□□□□□ -0.81
SPG11-201ENST00000261866 C12orf54Q6X4T0 127 aa10□□□□□ -0.81
SPG11-201ENST00000261866 PMS2P5A8MQ11 134 aa10□□□□□ -0.81
SPG11-201ENST00000261866 UQCR10Q9UDW1 63 aa10□□□□□ -0.81
SPG11-201ENST00000261866 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
SPG11-201ENST00000261866 LINC01356Q8N9X3 169 aa10□□□□□ -0.81
SPG11-201ENST00000261866 GFI1Q99684 422 aa10□□□□□ -0.81
SPG11-201ENST00000261866 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
SPG11-201ENST00000261866 OTORQ9NRC9 128 aa10□□□□□ -0.81
SPG11-201ENST00000261866 IL36BQ9NZH7 164 aa10□□□□□ -0.81
SPG11-201ENST00000261866 RFNGQ9Y644 331 aa10□□□□□ -0.81
SPG11-201ENST00000261866 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
SPG11-201ENST00000261866 ZNF362Q5T0B9 420 aaPredicted RBP10□□□□□ -0.81
SPG11-201ENST00000261866 LINC00477Q96M19 166 aa10□□□□□ -0.81
SPG11-201ENST00000261866 GATA4P43694 442 aa10□□□□□ -0.81
SPG11-201ENST00000261866 BMPERQ8N8U9 685 aa10□□□□□ -0.81
SPG11-201ENST00000261866 TMEM250H0YL14 139 aa10□□□□□ -0.81
SPG11-201ENST00000261866 MYO7BQ6PIF6 2116 aa10□□□□□ -0.81
SPG11-201ENST00000261866 C20orf204Q6ZNR8 217 aa10□□□□□ -0.81
SPG11-201ENST00000261866 CGB7P0DN87 165 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 SAA4P35542 130 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 PET117Q6UWS5 81 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 ST20Q9HBF5 79 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 C19orf67A6NJJ6 358 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 K7ENP7 123 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 SMDT1Q9H4I9 107 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 SUMO4Q6EEV6 95 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 C1QL4Q86Z23 238 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 FAM186AA6NE01 2351 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 Q8TAT8 98 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 CEP250Q9BV73 2442 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 LINC00271P0C7V0 271 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 TMEM155Q4W5P6 130 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 RCHY1Q96PM5 261 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 WFDC1Q9HC57 220 aa9.99□□□□□ -0.81
SPG11-201ENST00000261866 FABP5P3A8MUU1 101 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 SYNJ2BPP57105 145 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
SPG11-201ENST00000261866 PSG8Q9UQ74 426 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 DMRTC2Q8IXT2 367 aaPredicted RBP9.98□□□□□ -0.81
SPG11-201ENST00000261866 SEPSECSQ9HD40 501 aaKnown RBP9.98□□□□□ -0.81
SPG11-201ENST00000261866 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 DEFB130AP0DP74 79 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 NHLRC3Q5JS37 347 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 GGACTQ9BVM4 153 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 NEUROG3Q9Y4Z2 214 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 BUB1B-PAK6H3BSN5 160 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 PRCDQ00LT1 54 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 TMEM144Q7Z5S9 345 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 COQ2Q96H96 371 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 PVRIGQ6DKI7 326 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 LAMTOR3Q9UHA4 124 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 EPDR1Q9UM22 224 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 SPCS1Q9Y6A9 102 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 THSD7BQ9C0I4 1608 aa9.98□□□□□ -0.81
SPG11-201ENST00000261866 A0A087WX48 190 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 PSG1P11464 419 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 Q6ZS92 163 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms