RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 HINT1P49773 126 aaPredicted RBP11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 ZNF137PP52743 207 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 WT1-ASQ06250 92 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 C1orf174Q8IYL3 243 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 ZNF257Q9Y2Q1 563 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 HIGD1CA8MV81 97 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 M0R2Z0 102 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 TPSG1Q9NRR2 321 aa11.7□□□□□ -0.54
SFSWAP-201ENST00000261674 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 FAM167A-AS1Q96KT0 104 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 CHODLQ9H9P2 273 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 ZNF835Q9Y2P0 537 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 PEX7O00628 323 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 TCF21O43680 179 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 CD40P25942 277 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 KLRB1Q12918 225 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 ZNF430Q9H8G1 570 aaPredicted RBP11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 NKX6-3A6NJ46 265 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 ST6GALNAC6Q969X2 333 aa11.69□□□□□ -0.54
SFSWAP-201ENST00000261674 PATE2Q6UY27 113 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 C18orf32Q8TCD1 76 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 RITA1Q96K30 269 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 BET1LQ9NYM9 111 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 H0YJW9 148 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 ESDP10768 282 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 TMEM200BQ69YZ2 307 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 LYPD2Q6UXB3 125 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 NIT1Q86X76 327 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 PDPNQ86YL7 162 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 LINC01560Q8TB33 94 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 ASCL2Q99929 193 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 GAL3ST2Q9H3Q3 398 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 NDUFA4L2Q9NRX3 87 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 POLQO75417 2590 aa11.68□□□□□ -0.54
SFSWAP-201ENST00000261674 IGLV3-9A0A075B6K5 115 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 POU2AF1Q16633 256 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 OR10J3Q5JRS4 329 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 COL5A1-AS1Q5SY13 56 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 SIAH2O43255 324 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 BPIFB3P59826 476 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 C21orf62-AS1Q17RA5 79 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 GDF5OSQ5U4N7 250 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 RUSC1-AS1Q66K80 236 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 STPG4Q8N801 248 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 OSR1Q8TAX0 266 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 CSMD1Q96PZ7 3565 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 HYPMO75409 117 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 PRRX1P54821 245 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 ERASQ7Z444 233 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 OR4C13Q8NGP0 309 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 TNFRSF19Q9NS68 423 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 ARHGAP32A7KAX9 2087 aa11.67□□□□□ -0.54
SFSWAP-201ENST00000261674 PGLYRP4Q96LB8 373 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 MCRIP2Q9BUT9 160 aaKnown RBP11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 C19orf24Q9BVV8 132 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 UQCR10Q9UDW1 63 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 LINC00312Q9Y6C7 94 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 TNFRSF1AP19438 455 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 ZNF329Q86UD4 541 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 Q8N976 141 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 TP73-AS1Q9UF72 201 aa11.66□□□□□ -0.54
SFSWAP-201ENST00000261674 TRAV8-1A0A0A6YYK1 113 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 GNLYP22749 145 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 OR1L4Q8NGR5 311 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 CACNG8Q8WXS5 425 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 RAI1Q7Z5J4 1906 aaPredicted RBP11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 CSN3P07498 182 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 IGLC2P0DOY2 106 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 IGLC3P0DOY3 106 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 FAM222BQ8WU58 562 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 OR8B2Q96RD0 313 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 MRPL32Q9BYC8 188 aaKnown RBP11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 PRORYQ9H606 182 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 LAMTOR2Q9Y2Q5 125 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 A0A1B0GWJ7 208 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 NDUFB3O43676 98 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 TMEM108Q6UXF1 575 aa11.65□□□□□ -0.54
SFSWAP-201ENST00000261674 PPIAL4EA0A075B759 164 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 TCRBV4S1A1TA0A5B7 111 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 FNDC10F2Z333 226 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms