RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 OR9G4Q8NGQ1 327 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM170AQ8WVE7 144 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 IGFBPL1Q8WX77 278 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SDHCQ99643 169 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-202ENST00000261517 CYSLTR1Q9Y271 337 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM262E9PQX1 116 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SLAQ13239 276 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 ADIPOQQ15848 244 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 HCP5Q6MZN7 132 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 PRADC1Q9BSG0 188 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 JKAMPQ9P055 326 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 C5orf42Q9H799 3197 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 E9PQ18 207 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 IFI27P40305 119 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF415Q09FC8 603 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SPINK9Q5DT21 86 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 DERL1Q9BUN8 251 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TRAV41A0A0B4J266 112 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 C22orf46C9J442 243 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 UNQ6494/PRO21346Q6UXR6 183 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM89A2RUT3 159 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 IGLV1-44P01699 117 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 HOXA5P20719 270 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 IGFL2Q6UWQ7 119 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SH2D6Q7Z4S9 175 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 OR5A1Q8NGJ0 315 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 WNT10AQ9GZT5 417 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TLNRD1Q9H1K6 362 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 FAM181BA6NEQ2 426 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 QRFPP83859 136 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 IFITM3Q01628 133 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 POU2AF1Q16633 256 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SPATA45Q537H7 98 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF492Q9P255 531 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 MED13Q9UHV7 2174 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 CRYBB3P26998 211 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 FOXE3Q13461 319 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 RNF138Q8WVD3 245 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 PLEKHB2Q96CS7 222 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 A1L4Q6 167 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SLC25A20O43772 301 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 REG1BP48304 166 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 S100A7L2Q5SY68 101 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 FAM90A2PQ658T7 463 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 DYRK2Q92630 601 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 CCDC168Q8NDH2 2452 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 LMX1BO60663 402 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SMIM13P0DJ93 91 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 LDLRAD2Q5SZI1 272 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 SIGLEC15Q6ZMC9 328 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 ZNRF1Q8ND25 227 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 MRAP2Q96G30 205 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TBX15Q96SF7 602 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 HSPB9Q9BQS6 159 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TRBV20OR9-2A0A075B6H5 130 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-202ENST00000261517 IGKV1-9A0A0C4DH69 117 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 NPIPB5A8MRT5 1133 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM14BQ9NUH8 114 aa3.57□□□□□ -1.84
VPS13C-202ENST00000261517 F11RQ9Y624 299 aaKnown RBP3.57□□□□□ -1.84
VPS13C-202ENST00000261517 MED12LQ86YW9 2145 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 C17orf98A8MV24 154 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF137PP52743 207 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF585BQ52M93 769 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 LYZL4Q96KX0 146 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF56Q15929 161 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 FBLN7Q53RD9 439 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 Q6P435 159 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM75Q8N9X5 138 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 HIST1H4GQ99525 98 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 HCFC1P51610 2035 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 MSGN1A6NI15 193 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF98A6NK75 572 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF880Q6PDB4 577 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 VMO1Q7Z5L0 202 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 STHQ8IWL8 128 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 DEPPQ9NTK1 212 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 FAM27E3Q08E93 113 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 Q6ZSR3 168 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 H0YJW9 148 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 HBDP02042 147 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 HIVEP3Q5T1R4 2406 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 DPRXA6NFQ7 191 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 BUB1B-PAK6H3BSN5 160 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ICAM4Q14773 271 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 FAM110DQ8TAY7 271 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-202ENST00000261517 PSMB11A5LHX3 300 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 C1QTNF9P0C862 333 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 WFDC6Q9BQY6 131 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 LRP4O75096 1905 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 DYSFO75923 2080 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 IGHV1-3A0A0C4DH29 117 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 INSP01308 110 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 ZNF688P0C7X2 276 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 RPL39P5Q59GN2 51 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 COL4A4P53420 1690 aaPredicted RBP3.56□□□□□ -1.84
VPS13C-202ENST00000261517 CNTFRP26992 372 aa3.56□□□□□ -1.84
VPS13C-202ENST00000261517 RUNX1Q01196 453 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms