RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 TMEM196Q5HYL7 178 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 PVRIGQ6DKI7 326 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 ZNF497Q6ZNH5 498 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 RNF182Q8N6D2 247 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 DMDP11532 3685 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 IGHV1OR21-1A0A087WYE8 117 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 TRGV5A0A0B4J1U4 118 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 FABP5P3A8MUU1 101 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 M0R2P5 195 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 TAX1BP3O14907 124 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 FBXL15Q9H469 300 aa6.93□□□□□ -1.3
SNCAIP-201ENST00000261367 SPRY3O43610 288 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 IGKV3-11P04433 115 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 CD69Q07108 199 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 C8orf86Q6ZUL3 223 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 SMIM20Q8N5G0 67 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 IGHV4-39P01824 125 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 C8orf46Q8TAG6 207 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 IGKV1D-8A0A087WSZ0 117 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 TRAV26-1A0A087WT03 109 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 C12orf77C9JDV5 145 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 HAX1O00165 279 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 UPK2O00526 184 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 NDUFC2O95298 119 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 NUP37Q8NFH4 326 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 INSIG2Q9Y5U4 225 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 CSRP2Q16527 193 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 METTL26Q96S19 204 aa6.92□□□□□ -1.3
SNCAIP-201ENST00000261367 SPAG8Q99932 426 aaPredicted RBP6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 VKORC1Q9BQB6 163 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 REPIN1Q9BWE0 567 aaKnown RBP6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 ZIC3O60481 467 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 CD33P20138 364 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 PLPPR2Q96GM1 343 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 NAA38Q9BRA0 125 aaKnown RBP6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 SCRT2Q9NQ03 307 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 PSG8Q9UQ74 426 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 WNT2P09544 360 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 SCN3AQ9NY46 2000 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 WNT9BO14905 357 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 UCN2Q96RP3 112 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 SLC50A1Q9BRV3 221 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 EP300Q09472 2414 aaPredicted RBP6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 CREBBPQ92793 2442 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 ATG2AQ2TAZ0 1938 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 PLXND1Q9Y4D7 1925 aa6.91□□□□□ -1.3
SNCAIP-201ENST00000261367 TEX48A0A1B0GUV7 120 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 H0YJW9 148 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 CELA3AP09093 270 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 ZNF56Q15929 161 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 FOXI2Q6ZQN5 318 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 GPHA2Q96T91 129 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 FRYQ5TBA9 3013 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 IGLV3-32A0A0A0MS00 114 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 CCL2P13500 99 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 C3AR1Q16581 482 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 LINC00696Q6ZRV3 163 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 ABHD17AQ96GS6 310 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 PNRC2Q9NPJ4 139 aaKnown RBP6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 SLC25A15Q9Y619 301 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 RFNGQ9Y644 331 aa6.9□□□□□ -1.3
SNCAIP-201ENST00000261367 A0A0J9YW62 118 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 IGHV3-64DA0A0J9YX35 117 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 FOXH1O75593 365 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 EVI2AP22794 236 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 HLA-DMBP28068 263 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 LPAL2Q16609 132 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 ZC2HC1BQ5TFG8 222 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 ZNF441Q8N8Z8 693 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 LRRK1Q38SD2 2015 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 C9JAW5 83 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 D6R8Y8 96 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 IGKV1-5P01602 117 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 CELA2BP08218 269 aaPredicted RBP6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 ZNF726P1Q15940 193 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 MDP1Q86V88 176 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 LYZL4Q96KX0 146 aa6.9□□□□□ -1.31
SNCAIP-201ENST00000261367 TRAV24A0A0B4J272 114 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 PLAUP00749 431 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 PPP1R32Q7Z5V6 425 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 TCRAP04437 139 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 TMEM42Q69YG0 159 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 SCRT1Q9BWW7 348 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 CRISPLD2Q9H0B8 497 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 DEPPQ9NTK1 212 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 ARID1AO14497 2285 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 SS18L1O75177 396 aaPredicted RBP6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 NPYP01303 97 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 VDAC2P45880 294 aaPredicted RBP6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 DEFB127Q9H1M4 99 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 KIAA1549LQ6ZVL6 1849 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 SEC16AO15027 2179 aa6.89□□□□□ -1.31
SNCAIP-201ENST00000261367 GGTLC3B5MD39 225 aa6.88□□□□□ -1.31
SNCAIP-201ENST00000261367 PLXNA2O75051 1894 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms