RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 OCC1Q8TAD7 63 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 IMMP2LQ96T52 175 aa14.01□□□□□ -0.17
SSB-201ENST00000260956 AURKAIP1Q9NWT8 199 aaPredicted RBP14.01□□□□□ -0.17
SSB-201ENST00000260956 SONP18583 2426 aaKnown RBP14□□□□□ -0.17
SSB-201ENST00000260956 TRGC1P0CF51 173 aa14□□□□□ -0.17
SSB-201ENST00000260956 TEX38Q6PEX7 206 aa14□□□□□ -0.17
SSB-201ENST00000260956 NECAP1Q8NC96 275 aa14□□□□□ -0.17
SSB-201ENST00000260956 C12orf57Q99622 126 aa14□□□□□ -0.17
SSB-201ENST00000260956 ABCA2Q9BZC7 2435 aa14□□□□□ -0.17
SSB-201ENST00000260956 SMIM6P0DI80 62 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 ETFRF1Q6IPR1 90 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 Q8N6K4 173 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 OR4X1Q8NH49 305 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 SFRP2Q96HF1 295 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 UHRF2Q96PU4 802 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 PFDN5Q99471 154 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 SIRPDQ9H106 197 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 ZNF355PQ9NSJ1 428 aa13.99□□□□□ -0.17
SSB-201ENST00000260956 I3L2K1 104 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 NDUFS8O00217 210 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 CORTO00230 105 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 OR7C2O60412 319 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 HOXB4P17483 251 aaPredicted RBP13.98□□□□□ -0.17
SSB-201ENST00000260956 GPR6P46095 362 aaPredicted RBP13.98□□□□□ -0.17
SSB-201ENST00000260956 PLP1P60201 277 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 SSX2Q16385 188 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 DYNAPQ8N1N2 210 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 OR1L4Q8NGR5 311 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 EAF1Q96JC9 268 aaPredicted RBP13.98□□□□□ -0.17
SSB-201ENST00000260956 IGF2BP2-AS1Q96M15 143 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 OR5B12Q96R08 314 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 PIMREGQ9BSJ6 248 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 TNFRSF19Q9NS68 423 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 ANK3Q12955 4377 aaKnown RBP13.98□□□□□ -0.17
SSB-201ENST00000260956 PPP1R2P9O14990 202 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 MOSP00540 346 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 OR10J4P0C629 311 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 SLC25A16P16260 332 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 MYCNOSP40205 109 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 CDX1P47902 265 aaPredicted RBP13.98□□□□□ -0.17
SSB-201ENST00000260956 LCN2P80188 198 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 C10orf113Q5VZT2 155 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 OR5AU1Q8NGC0 362 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 FXYD5Q96DB9 178 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 MISP3Q96FF7 219 aa13.98□□□□□ -0.17
SSB-201ENST00000260956 NBR2O15453 112 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 COX7A2P2O60397 106 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 IGLV2-8P01709 118 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 S100PP25815 95 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 FOXL1Q12952 345 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 EBI3Q14213 229 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 OR2T10Q8NGZ9 312 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 AJUBAQ96IF1 538 aa13.97□□□□□ -0.17
SSB-201ENST00000260956 IGLC1P0CG04 106 aa13.96□□□□□ -0.17
SSB-201ENST00000260956 APELAP0DMC3 54 aa13.96□□□□□ -0.17
SSB-201ENST00000260956 CEACAM3P40198 252 aa13.96□□□□□ -0.17
SSB-201ENST00000260956 BPIFB3P59826 476 aa13.96□□□□□ -0.17
SSB-201ENST00000260956 LOXL1Q08397 574 aaPredicted RBP13.96□□□□□ -0.17
SSB-201ENST00000260956 ACTL10Q5JWF8 245 aa13.96□□□□□ -0.17
SSB-201ENST00000260956 VMO1Q7Z5L0 202 aa13.96□□□□□ -0.17
SSB-201ENST00000260956 A0A1W2PPQ1 181 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 OOSP1A8MZH6 123 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 PYYP10082 97 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 FOSL1P15407 271 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 CRYBB3P26998 211 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 NDUFA6P56556 154 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 FAM3BP58499 235 aaPredicted RBP13.95□□□□□ -0.18
SSB-201ENST00000260956 RPL15P61313 204 aaKnown RBP13.95□□□□□ -0.18
SSB-201ENST00000260956 UBE2L3P68036 154 aaKnown RBP13.95□□□□□ -0.18
SSB-201ENST00000260956 MMDQ15546 238 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 CENPWQ5EE01 88 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 COA6Q5JTJ3 125 aaKnown RBP13.95□□□□□ -0.18
SSB-201ENST00000260956 Q71RC1 249 aaPredicted RBP13.95□□□□□ -0.18
SSB-201ENST00000260956 HIST3H2BBQ8N257 126 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 OR5T1Q8NG75 326 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 MDFIC2A0A1B0GVS7 189 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 K7EIM0 57 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 LY6G6DO95868 133 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 FN1P02751 2386 aaKnown RBP13.95□□□□□ -0.18
SSB-201ENST00000260956 LMO4P61968 165 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 TCEAL7Q9BRU2 100 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 MXRA5Q9NR99 2828 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 HILPDAQ9Y5L2 63 aa13.95□□□□□ -0.18
SSB-201ENST00000260956 ELOA3CA0A087WX78 387 aaPredicted RBP13.94□□□□□ -0.18
SSB-201ENST00000260956 C5orf64Q2M2E5 130 aa13.94□□□□□ -0.18
SSB-201ENST00000260956 MINOS1Q5TGZ0 78 aa13.94□□□□□ -0.18
SSB-201ENST00000260956 ASPHD1Q5U4P2 390 aa13.94□□□□□ -0.18
SSB-201ENST00000260956 GFI1BQ5VTD9 330 aa13.94□□□□□ -0.18
SSB-201ENST00000260956 PAXXQ9BUH6 204 aa13.94□□□□□ -0.18
SSB-201ENST00000260956 MINOS1-NBL1R4GNA1 71 aa13.94□□□□□ -0.18
SSB-201ENST00000260956 CUBNO60494 3623 aa13.94□□□□□ -0.18
SSB-201ENST00000260956 IGHV2-70DA0A0C4DH43 119 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 PPP5D1E7EU14 171 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 GP9P14770 177 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 ZNF329Q86UD4 541 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 OR10G8Q8NGN5 311 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 V9GYV3 84 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 IGKV1-17P01599 117 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 IGHV4-31P0DP07 118 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 SUMO1P63165 101 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms