RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 UNQ5815/PRO19632Q6UWF5 114 aa11.76□□□□□ -0.53
FGFR3-201ENST00000260795 Q6ZSR3 168 aa11.76□□□□□ -0.53
FGFR3-201ENST00000260795 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
FGFR3-201ENST00000260795 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
FGFR3-201ENST00000260795 PF4V1P10720 104 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 COL8A2P25067 703 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 S100A7P31151 101 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 FOXL1Q12952 345 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.75□□□□□ -0.53
FGFR3-201ENST00000260795 C19orf24Q9BVV8 132 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 LINC00312Q9Y6C7 94 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 LCN12Q6JVE5 192 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 MRPL32Q9BYC8 188 aaKnown RBP11.75□□□□□ -0.53
FGFR3-201ENST00000260795 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 IFITM10A6NMD0 228 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 ZNF207O43670 478 aaKnown RBP11.75□□□□□ -0.53
FGFR3-201ENST00000260795 LMO1P25800 156 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 PMCHL1Q16048 86 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
FGFR3-201ENST00000260795 REV3LO60673 3130 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 KLRD1Q13241 179 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 E7EQL1 145 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 MMP23AO75900 390 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 TRBV9A0A0B4J1U6 114 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 IGHV3-66A0A0C4DH42 116 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 TM4SF5O14894 197 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 GOSR1O95249 250 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 CA7P43166 264 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 MBNL2Q5VZF2 373 aaKnown RBP11.74□□□□□ -0.53
FGFR3-201ENST00000260795 CCL19Q99731 98 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 MTORP42345 2549 aa11.74□□□□□ -0.53
FGFR3-201ENST00000260795 EREGO14944 169 aa11.73□□□□□ -0.53
FGFR3-201ENST00000260795 CACNG8Q8WXS5 425 aa11.73□□□□□ -0.53
FGFR3-201ENST00000260795 PPOXP50336 477 aa11.73□□□□□ -0.53
FGFR3-201ENST00000260795 CORTO00230 105 aa11.73□□□□□ -0.53
FGFR3-201ENST00000260795 CCDC144NLQ6NUI1 221 aa11.73□□□□□ -0.53
FGFR3-201ENST00000260795 ASCL2Q99929 193 aa11.73□□□□□ -0.53
FGFR3-201ENST00000260795 FOXA2Q9Y261 457 aaPredicted RBP11.73□□□□□ -0.53
FGFR3-201ENST00000260795 HBBP68871 147 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 TMEM200BQ69YZ2 307 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 DPM3Q9P2X0 92 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 SPRNQ5BIV9 151 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 OR4A5Q8NH83 315 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 PRDM13Q9H4Q3 707 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 DKK4Q9UBT3 224 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 DNAH14Q0VDD8 3507 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 SORL1Q92673 2214 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 A0A1W2PRE2 83 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 MIEN1Q9BRT3 115 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
FGFR3-201ENST00000260795 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 NMUP48645 174 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 IGFBPL1Q8WX77 278 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 RABAC1Q9UI14 185 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 IZUMO1RA6ND01 250 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.53
FGFR3-201ENST00000260795 TWIST1Q15672 202 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 C11orf53Q8IXP5 236 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 MAPK1IP1LQ8NDC0 245 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 GPR82Q96P67 336 aa11.71□□□□□ -0.53
FGFR3-201ENST00000260795 FAM106CPP0CH98 169 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 LURAP1LQ8IV03 231 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 ODF3L1Q8IXM7 274 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 ZNF738Q8NE65 137 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 Q9H3A6 140 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 TMEM189A5PLL7 270 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 A8MWP6 167 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 TMEM178BH3BS89 294 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 M0QZ24 198 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 TGFAP01135 160 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 NPPCP23582 126 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 KRTAP27-1Q3LI81 207 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 KLF17Q5JT82 389 aaPredicted RBP11.71□□□□□ -0.54
FGFR3-201ENST00000260795 NUDT10Q8NFP7 164 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 NUDT11Q96G61 164 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 HSPB8Q9UJY1 196 aa11.71□□□□□ -0.54
FGFR3-201ENST00000260795 SH2D7A6NKC9 451 aaPredicted RBP11.7□□□□□ -0.54
FGFR3-201ENST00000260795 NDUFS7O75251 213 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 C19orf35Q6ZS72 473 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 AREGP15514 252 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 BTF3P20290 206 aaKnown RBP11.7□□□□□ -0.54
FGFR3-201ENST00000260795 VDAC2P45880 294 aaPredicted RBP11.7□□□□□ -0.54
FGFR3-201ENST00000260795 SCRT1Q9BWW7 348 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 C7orf69Q9H7B7 122 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 GAFA1Q96PS6 74 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 TMEM70Q9BUB7 260 aa11.7□□□□□ -0.54
FGFR3-201ENST00000260795 MCRIP2Q9BUT9 160 aaKnown RBP11.7□□□□□ -0.54
FGFR3-201ENST00000260795 TCRBV4S1A1TA0A5B7 111 aa11.69□□□□□ -0.54
FGFR3-201ENST00000260795 FBLL1A6NHQ2 334 aaKnown RBP11.69□□□□□ -0.54
FGFR3-201ENST00000260795 CKS2P33552 79 aa11.69□□□□□ -0.54
FGFR3-201ENST00000260795 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
FGFR3-201ENST00000260795 LAMA1P25391 3075 aa11.69□□□□□ -0.54
FGFR3-201ENST00000260795 TIMM23O14925 209 aa11.69□□□□□ -0.54
FGFR3-201ENST00000260795 IGLV2-14P01704 120 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms