RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 FAM90A26D6RGX4 464 aa12.22□□□□□ -0.45
CGREF1-201ENST00000260595 KLF9Q13886 244 aaPredicted RBP12.22□□□□□ -0.45
CGREF1-201ENST00000260595 OR51G1Q8NGK1 321 aa12.22□□□□□ -0.45
CGREF1-201ENST00000260595 C2CD4CQ8TF44 421 aa12.22□□□□□ -0.45
CGREF1-201ENST00000260595 NRN1Q9NPD7 142 aa12.22□□□□□ -0.45
CGREF1-201ENST00000260595 CLEC5AQ9NY25 188 aa12.22□□□□□ -0.45
CGREF1-201ENST00000260595 VPS13DQ5THJ4 4388 aa12.22□□□□□ -0.45
CGREF1-201ENST00000260595 FRAS1Q86XX4 4008 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 IGKV1D-37A0A075B6S9 117 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 ELOA3CA0A087WX78 387 aaPredicted RBP12.21□□□□□ -0.45
CGREF1-201ENST00000260595 PITX3O75364 302 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 SRPXP78539 464 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 PRR20EP86478 221 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 PRR20CP86479 221 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 PRR20DP86480 221 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 PRR20BP86481 221 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 PRR20AP86496 221 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 GAMTQ14353 236 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 SIGLEC15Q6ZMC9 328 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 MCFD2Q8NI22 146 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 TRIM63Q969Q1 353 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 RNF125Q96EQ8 232 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 APLNQ9ULZ1 77 aa12.21□□□□□ -0.45
CGREF1-201ENST00000260595 DNAH10Q8IVF4 4471 aa12.2□□□□□ -0.46
CGREF1-201ENST00000260595 C11orf94C9JXX5 98 aa12.2□□□□□ -0.46
CGREF1-201ENST00000260595 H3BMM0 161 aa12.2□□□□□ -0.46
CGREF1-201ENST00000260595 ANXA3P12429 323 aa12.2□□□□□ -0.46
CGREF1-201ENST00000260595 GPX4P36969 197 aaPredicted RBP12.2□□□□□ -0.46
CGREF1-201ENST00000260595 ATP5IP56385 69 aaPredicted RBP12.2□□□□□ -0.46
CGREF1-201ENST00000260595 TCTAP57738 103 aa12.2□□□□□ -0.46
CGREF1-201ENST00000260595 TBC1D24Q9ULP9 559 aa12.2□□□□□ -0.46
CGREF1-201ENST00000260595 HLA-DMBP28068 263 aa12.19□□□□□ -0.46
CGREF1-201ENST00000260595 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
CGREF1-201ENST00000260595 ZNF90Q03938 601 aa12.19□□□□□ -0.46
CGREF1-201ENST00000260595 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
CGREF1-201ENST00000260595 OR1S1Q8NH92 325 aa12.19□□□□□ -0.46
CGREF1-201ENST00000260595 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
CGREF1-201ENST00000260595 IGLL5B9A064 214 aa12.18□□□□□ -0.46
CGREF1-201ENST00000260595 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
CGREF1-201ENST00000260595 TMEM128Q5BJH2 165 aa12.18□□□□□ -0.46
CGREF1-201ENST00000260595 Q6ZTC4 211 aa12.18□□□□□ -0.46
CGREF1-201ENST00000260595 TMED4Q7Z7H5 227 aa12.18□□□□□ -0.46
CGREF1-201ENST00000260595 LRTM2Q8N967 370 aa12.18□□□□□ -0.46
CGREF1-201ENST00000260595 V9GYH0 126 aa12.18□□□□□ -0.46
CGREF1-201ENST00000260595 ZFP92A6NM28 416 aa12.17□□□□□ -0.46
CGREF1-201ENST00000260595 SLC25A6P12236 298 aa12.17□□□□□ -0.46
CGREF1-201ENST00000260595 HLA-DRB4P13762 266 aa12.17□□□□□ -0.46
CGREF1-201ENST00000260595 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
CGREF1-201ENST00000260595 NKX2-1P43699 371 aaPredicted RBP12.17□□□□□ -0.46
CGREF1-201ENST00000260595 ZNF79Q15937 498 aa12.17□□□□□ -0.46
CGREF1-201ENST00000260595 TOMM5Q8N4H5 51 aa12.17□□□□□ -0.46
CGREF1-201ENST00000260595 PBDC1Q9BVG4 233 aa12.17□□□□□ -0.46
CGREF1-201ENST00000260595 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
CGREF1-201ENST00000260595 HLA-DRB4X5D2U9 266 aa12.17□□□□□ -0.46
CGREF1-201ENST00000260595 IGKV1OR2-108A0A075B7D4 117 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 NUP62P37198 522 aaPredicted RBP12.16□□□□□ -0.46
CGREF1-201ENST00000260595 DEFB1P60022 68 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 NUTF2P61970 127 aaKnown RBP12.16□□□□□ -0.46
CGREF1-201ENST00000260595 PYDC2Q56P42 97 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 GDF5OSQ5U4N7 250 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 SLC35E1Q96K37 410 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 C1QTNF4Q9BXJ3 329 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 CELA1Q9UNI1 258 aa12.16□□□□□ -0.46
CGREF1-201ENST00000260595 TRAV10A0A0B4J240 114 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 SOCS3O14543 225 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 IAPPP10997 89 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 AP3S2P59780 193 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 C12orf74Q32Q52 190 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 C1orf194Q5T5A4 169 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 TRGV9Q99603 122 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 SLC25A21Q9BQT8 299 aaPredicted RBP12.15□□□□□ -0.46
CGREF1-201ENST00000260595 PFDN2Q9UHV9 154 aa12.15□□□□□ -0.46
CGREF1-201ENST00000260595 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 PRSS46E5RG02 174 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 SFT2D2O95562 160 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 VAMP1P23763 118 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 LYZP61626 148 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 RAB11AP62491 216 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 OR2F1Q13607 317 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 ZNF705AQ6ZN79 300 aaPredicted RBP12.14□□□□□ -0.47
CGREF1-201ENST00000260595 THAP8Q8NA92 274 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 DNAH6Q9C0G6 4158 aa12.14□□□□□ -0.47
CGREF1-201ENST00000260595 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
CGREF1-201ENST00000260595 FABP1P07148 127 aa12.13□□□□□ -0.47
CGREF1-201ENST00000260595 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
CGREF1-201ENST00000260595 CCDC190Q86UF4 302 aa12.13□□□□□ -0.47
CGREF1-201ENST00000260595 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
CGREF1-201ENST00000260595 NEU1Q99519 415 aa12.13□□□□□ -0.47
CGREF1-201ENST00000260595 SAV1Q9H4B6 383 aaPredicted RBP12.13□□□□□ -0.47
CGREF1-201ENST00000260595 TMED3Q9Y3Q3 217 aa12.13□□□□□ -0.47
CGREF1-201ENST00000260595 ZNF705FA8MVS1 300 aaPredicted RBP12.12□□□□□ -0.47
CGREF1-201ENST00000260595 MED6O75586 246 aa12.12□□□□□ -0.47
CGREF1-201ENST00000260595 ZNF705DP0CH99 300 aaPredicted RBP12.12□□□□□ -0.47
CGREF1-201ENST00000260595 ZNF705BP0CI00 300 aaPredicted RBP12.12□□□□□ -0.47
CGREF1-201ENST00000260595 PSMB3P49720 205 aa12.12□□□□□ -0.47
CGREF1-201ENST00000260595 FOXI2Q6ZQN5 318 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms