RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TAAR5O14804 337 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 AGPAT2O15120 278 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 BCL2L11O43521 198 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 IFNA5P01569 189 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 YPEL3P61236 119 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 ZNF616Q08AN1 781 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 ZNF266Q14584 549 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 FAM122CQ6P4D5 195 aa12.13□□□□□ -0.47
CCDC90B-201ENST00000260054 KANTRA0A1W2PQU2 76 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 KRBOX1C9JBD0 128 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 SCGB2A1O75556 95 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 SLURP1P55000 103 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 RPEL1Q2QD12 228 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 PXDC1Q5TGL8 231 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 DPF1Q92782 380 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 NPCDR1Q9BY65 106 aa12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-201ENST00000260054 MPDU1O75352 247 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 TOMM40O96008 361 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 PSG1P11464 419 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 CAMLGP49069 296 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 RELQ04864 619 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 ZNF600Q6ZNG1 722 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 CYP2G1PQ6ZSU1 146 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 RSG1Q9BU20 258 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 SLC45A2Q9UMX9 530 aa12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 PUS1Q9Y606 427 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC90B-201ENST00000260054 BORCS7-ASMTA0A0B4J1R7 106 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 RD3LP0DJH9 198 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 MYCNOSP40205 109 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 UNQ9165/PRO28630Q6UXU0 137 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 HSD17B11Q8NBQ5 300 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 RCC1LQ96I51 464 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 PFDN2Q9UHV9 154 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 RFNGQ9Y644 331 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 WNK1Q9H4A3 2382 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 NDUFA4O00483 81 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 JTBO76095 146 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 RAB31Q13636 194 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 KLF5Q13887 457 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 MIC13Q5XKP0 118 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 TOMM20LQ6UXN7 152 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 GPHB5Q86YW7 130 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 BPIFCQ8NFQ6 507 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 ZNF471Q9BX82 626 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 ZFAND3Q9H8U3 227 aa12.1□□□□□ -0.47
CCDC90B-201ENST00000260054 YIF1AO95070 293 aa12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 FABP1P07148 127 aa12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 SYNJ2BPP57105 145 aa12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 KRTAP21-3Q3LHN1 58 aa12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 EIF4E3Q8N5X7 224 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 OR4F17Q8NGA8 305 aa12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 Q8WTZ3 238 aa12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 PCNPQ8WW12 178 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 DLX4Q92988 240 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 OR4F4Q96R69 305 aa12.09□□□□□ -0.47
CCDC90B-201ENST00000260054 IL4P05112 153 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 NMBP08949 121 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 LINC00869P0C866 280 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 ATP6V0CP27449 155 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 SELENOTP62341 195 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 PRR20EP86478 221 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 PRR20CP86479 221 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 PRR20DP86480 221 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 PRR20BP86481 221 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 PRR20AP86496 221 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 STPG3Q8N7X2 389 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 OR51G1Q8NGK1 321 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 TMEM190Q8WZ59 177 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 LINC00052Q96N35 136 aa12.08□□□□□ -0.48
CCDC90B-201ENST00000260054 WI2-2373I1.2A0A1W2PRP0 233 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 ZNF320A2RRD8 509 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 TSPAN15O95858 294 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 PF4P02776 101 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 FAM106AQ4KMX7 169 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 C1QL4Q86Z23 238 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 C20orf24Q9BUV8 137 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 SH3BGRL3Q9H299 93 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 ARV1Q9H2C2 271 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 VWFP04275 2813 aa12.07□□□□□ -0.48
CCDC90B-201ENST00000260054 C17orf112F2Z3M2 114 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 LYZP61626 148 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 B2MP61769 119 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 REC114Q7Z4M0 266 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 ZNF709Q8N972 641 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 RNF125Q96EQ8 232 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 GINS3Q9BRX5 216 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 PBDC1Q9BVG4 233 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 ANK2Q01484 3957 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 LGALS9O00182 355 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms