RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 MAP1LC3B2A6NCE7 125 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 SCGB2A1O75556 95 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 TOMM40O96008 361 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 FABP1P07148 127 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 FGF8P55075 233 aaPredicted RBP13.79□□□□□ -0.2
IMP4-201ENST00000259239 YPEL3P61236 119 aaPredicted RBP13.79□□□□□ -0.2
IMP4-201ENST00000259239 SPATA31B1PQ5VZV4 182 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 SPSB3Q6PJ21 355 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 COMMD7Q86VX2 200 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 MAP1LC3BQ9GZQ8 125 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 SEPSECSQ9HD40 501 aaKnown RBP13.79□□□□□ -0.2
IMP4-201ENST00000259239 PFDN2Q9UHV9 154 aa13.79□□□□□ -0.2
IMP4-201ENST00000259239 A0A0G2JLM5 398 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 A0A1W2PPV4 95 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 PPP5D1E7EU14 171 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 NUPL2O15504 423 aaKnown RBP13.78□□□□□ -0.2
IMP4-201ENST00000259239 TGOLN2O43493 480 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 TCF21O43680 179 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 COX7A2P2O60397 106 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 RPLP1P05386 114 aaKnown RBP13.78□□□□□ -0.2
IMP4-201ENST00000259239 ORM2P19652 201 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 LYZP61626 148 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 RHOBP62745 196 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 FOXE3Q13461 319 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 FAM78BQ5VT40 261 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 PATE2Q6UY27 113 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 OR1B1Q8NGR6 318 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 MBD3L1Q8WWY6 194 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 GNB4Q9HAV0 340 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 GAR1Q9NY12 217 aaKnown RBP13.78□□□□□ -0.2
IMP4-201ENST00000259239 IGHV3-35A0A0C4DH35 117 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 ELANEP08246 267 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 OR5G3P0C626 314 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 SRSF2Q01130 221 aaKnown RBP13.78□□□□□ -0.2
IMP4-201ENST00000259239 KLHDC1Q8N7A1 406 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 OR51G1Q8NGK1 321 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 UHRF2Q96PU4 802 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 PFDN5Q99471 154 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 DNAJC4Q9NNZ3 241 aa13.78□□□□□ -0.2
IMP4-201ENST00000259239 TRBV12-3P01733 135 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 IL4P05112 153 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 CCL20P78556 96 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 KIAA0141Q14154 515 aaPredicted RBP13.77□□□□□ -0.21
IMP4-201ENST00000259239 C10orf113Q5VZT2 155 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 MIR17HGQ75NE6 70 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 OR1L4Q8NGR5 311 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 GATAD1Q8WUU5 269 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 PBDC1Q9BVG4 233 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 MED9Q9NWA0 146 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 FUT9Q9Y231 359 aa13.77□□□□□ -0.21
IMP4-201ENST00000259239 C2CD3Q4AC94 2353 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
IMP4-201ENST00000259239 PLP1P60201 277 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 OR4X2Q8NGF9 303 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 RNF125Q96EQ8 232 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 ZNF414Q96IQ9 312 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 OR5B12Q96R08 314 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 ATP6V0BQ99437 205 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 C19orf24Q9BVV8 132 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 TRAV1-1A0A0B4J248 108 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 ANKRD34BA5PLL1 514 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 HYPMO75409 117 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 HBE1P02100 147 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 ARL3P36405 182 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 MORN5Q5VZ52 161 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 ZNF343Q6P1L6 599 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 ZNF491Q8N8L2 437 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 RNF152Q8N8N0 203 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 Q8WTZ3 238 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 C16orf95Q9H693 158 aa13.76□□□□□ -0.21
IMP4-201ENST00000259239 PUS1Q9Y606 427 aaKnown RBP eCLIP13.76□□□□□ -0.21
IMP4-201ENST00000259239 ELOA3CA0A087WX78 387 aaPredicted RBP13.75□□□□□ -0.21
IMP4-201ENST00000259239 WI2-2373I1.2A0A1W2PRP0 233 aa13.75□□□□□ -0.21
IMP4-201ENST00000259239 OR2C1O95371 312 aa13.75□□□□□ -0.21
IMP4-201ENST00000259239 IL34Q6ZMJ4 242 aa13.75□□□□□ -0.21
IMP4-201ENST00000259239 ZNF600Q6ZNG1 722 aa13.75□□□□□ -0.21
IMP4-201ENST00000259239 LINC00305Q7Z4B0 112 aa13.75□□□□□ -0.21
IMP4-201ENST00000259239 OR5AU1Q8NGC0 362 aa13.75□□□□□ -0.21
IMP4-201ENST00000259239 LINC01006Q8NI28 216 aa13.75□□□□□ -0.21
IMP4-201ENST00000259239 STAG3L2P0CL84 134 aa13.74□□□□□ -0.21
IMP4-201ENST00000259239 STAG3L3P0CL85 134 aa13.74□□□□□ -0.21
IMP4-201ENST00000259239 USF2Q15853 346 aaPredicted RBP13.74□□□□□ -0.21
IMP4-201ENST00000259239 MARC2Q969Z3 335 aa13.74□□□□□ -0.21
IMP4-201ENST00000259239 RNF2Q99496 336 aa13.74□□□□□ -0.21
IMP4-201ENST00000259239 MRPL32Q9BYC8 188 aaKnown RBP13.74□□□□□ -0.21
IMP4-201ENST00000259239 TMPRSS5Q9H3S3 457 aa13.74□□□□□ -0.21
IMP4-201ENST00000259239 HIGD1AQ9Y241 93 aa13.74□□□□□ -0.21
IMP4-201ENST00000259239 IGHV3OR16-8A0A075B7F1 116 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 ARL14EPLP0DKL9 152 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 IQCF2Q8IXL9 164 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 COMMD1Q8N668 190 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 CITED4Q96RK1 184 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 JMJD1CQ15652 2540 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 TRAV5A0A0B4J249 113 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 ATP6V1G1O75348 118 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 NDUFA7O95182 113 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 TCTEX1D4Q5JR98 221 aa13.73□□□□□ -0.21
IMP4-201ENST00000259239 WIPF2Q8TF74 440 aaPredicted RBP13.73□□□□□ -0.21
IMP4-201ENST00000259239 MRPL27Q9P0M9 148 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms