RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ZC2HC1BQ5TFG8 222 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 PAXXQ9BUH6 204 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 NXPH1P58417 271 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 PEAR1Q5VY43 1037 aaPredicted RBP5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 TRIP11Q15643 1979 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 ZNF646O15015 1829 aaPredicted RBP5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 CCDC88CQ9P219 2028 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 EDN2P20800 178 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 LEPP41159 167 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 ZIC1Q15915 447 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 PILRAQ9UKJ1 303 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 CTLA4P16410 223 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 NUMA1Q14980 2115 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 hADV29S1A0JD25 119 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 MIC13Q5XKP0 118 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 EBLN2Q6P2I7 272 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 WFDC3Q8IUB2 231 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 SFTPA1Q8IWL2 248 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 A0A0B4J2E0 115 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 A0A1B0GX12 115 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 OOSP1A8MZH6 123 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 COX7CP15954 63 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 PLNP26678 52 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 HLA-DMBP28068 263 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 FGFRL1Q8N441 504 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 RFLNBQ8N5W9 214 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 HIGD1BQ9P298 99 aa5.58□□□□□ -1.52
PDGFRA-201ENST00000257290 RNF182Q8N6D2 247 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 SRSF12Q8WXF0 261 aaKnown RBP5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 SNRNP40Q96DI7 357 aaKnown RBP5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 C18orf12Q96KH6 178 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 IMUPQ9GZP8 106 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 FRG2CA6NGY1 282 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 IGHG2P01859 326 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 MPV17P39210 176 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 IGFBP7Q16270 282 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 CBLN3Q6UW01 205 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 LINC01555Q8NAE3 123 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 GATAD1Q8WUU5 269 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 TRGV11A0A075B6L2 103 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 F2Z2F3 143 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 IL9P15248 144 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 FKBP2P26885 142 aaKnown RBP5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 IL15RAQ13261 267 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 C10orf113Q5VZT2 155 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 TMEM190Q8WZ59 177 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 FOXB1Q99853 325 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 TCRBV4S1A1TA0A5B7 111 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 NDUFB3O43676 98 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 IFI27P40305 119 aaPredicted RBP5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 LINC00526Q96FQ7 95 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 WFDC6Q9BQY6 131 aa5.57□□□□□ -1.52
PDGFRA-201ENST00000257290 EPOPA6NHQ4 379 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TMEM229AB2RXF0 380 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 NCR2O95944 276 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 C8orf88P0DMB2 117 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 ZNF141Q15928 474 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TRPT1Q86TN4 253 aaKnown RBP5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 C16orf92Q96LL3 132 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TRAV8-3A0A0A6YYJ7 113 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 CSRP3P50461 194 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 CCL8P80075 99 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TNFAIP6P98066 277 aaPredicted RBP5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 ZNF441Q8N8Z8 693 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 GTSF1Q8WW33 167 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 PRDM14Q9GZV8 571 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 RPUSD1Q9UJJ7 312 aaKnown RBP5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 A0A1W2PPV9 198 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 BUB3O43684 328 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 GFERP55789 205 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TCF15Q12870 199 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 SPINK9Q5DT21 86 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 LINC00643Q86TS7 51 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 ZNRF2Q8NHG8 242 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 LCTP09848 1927 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 A0A0B4J2C4 111 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TIMM23O14925 209 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 C1QL2Q7Z5L3 287 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 A0A087WX48 190 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 EPPINO95925 133 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 VWC2Q2TAL6 325 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 PRNTQ86SH4 94 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TMEM86BQ8N661 226 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 TM2D2Q9BX73 214 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 PRO1854Q9UHT4 67 aa5.56□□□□□ -1.52
PDGFRA-201ENST00000257290 E9PLD3 99 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 ETV2O00321 342 aaPredicted RBP5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 LMO1P25800 156 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 TEX45Q8NA69 505 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 GPHA2Q96T91 129 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 FXYD2P54710 66 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 Q6ZS92 163 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 RNF152Q8N8N0 203 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 CFHR4Q92496 578 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 MYOD1P15172 320 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 HOXA4Q00056 320 aaPredicted RBP5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 ZNF793Q6ZN11 406 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 ZAR1Q86SH2 424 aa5.55□□□□□ -1.52
PDGFRA-201ENST00000257290 SLC25A15Q9Y619 301 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms