RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PEX7O00628 323 aa15.26■□□□□ 0.03
SNX4-201ENST00000251775 RNASE2P10153 161 aaKnown RBP15.26■□□□□ 0.03
SNX4-201ENST00000251775 ZNF841Q6ZN19 808 aa15.26■□□□□ 0.03
SNX4-201ENST00000251775 LINC00173Q6ZV60 143 aa15.26■□□□□ 0.03
SNX4-201ENST00000251775 C1RLQ9NZP8 487 aa15.26■□□□□ 0.03
SNX4-201ENST00000251775 SH3BGRL2Q9UJC5 107 aa15.26■□□□□ 0.03
SNX4-201ENST00000251775 ACACAQ13085 2346 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 hDV102S1A0JD36 115 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 C17orf100A8MU93 164 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 PRRG2O14669 202 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 FCN3O75636 299 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 THBDP07204 575 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 CD69Q07108 199 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 BVES-AS1Q5T3Y7 98 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 ATP5L2Q7Z4Y8 100 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 RNF24Q9Y225 148 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 WASHC3Q9Y3C0 194 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 SYS1-DBNDD2H3BUS1 97 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 NUDT3O95989 172 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 BSPH1Q075Z2 132 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 LINC00312Q9Y6C7 94 aa15.25■□□□□ 0.03
SNX4-201ENST00000251775 TNFRSF1AP19438 455 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 OR1L8Q8NGR8 309 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 RND1Q92730 232 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 CHRDL1Q9BU40 450 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 ANKRD11Q6UB99 2663 aaPredicted RBP15.24■□□□□ 0.03
SNX4-201ENST00000251775 IGHV1-24A0A0C4DH33 117 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 HIST1H1EP10412 219 aaKnown RBP15.24■□□□□ 0.03
SNX4-201ENST00000251775 RPS20P60866 119 aaKnown RBP15.24■□□□□ 0.03
SNX4-201ENST00000251775 LDLRAD2Q5SZI1 272 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 OR10W1Q8NGF6 305 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 CST9LQ9H4G1 147 aa15.24■□□□□ 0.03
SNX4-201ENST00000251775 OR2T8A6NH00 312 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 PSG1P11464 419 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 CCL3L1P16619 93 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 CD24P25063 80 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 SSBP2P81877 361 aaPredicted RBP15.23■□□□□ 0.03
SNX4-201ENST00000251775 TMEM30BQ3MIR4 351 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 SSX8Q7RTT4 187 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 DEFB125Q8N687 156 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 Q8NA96 180 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 ZNF714Q96N38 554 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 PAXXQ9BUH6 204 aa15.23■□□□□ 0.03
SNX4-201ENST00000251775 FOXA3P55318 350 aaPredicted RBP15.23■□□□□ 0.03
SNX4-201ENST00000251775 ATP5IP56385 69 aaPredicted RBP15.23■□□□□ 0.03
SNX4-201ENST00000251775 MUC21A0A0G2JKD1 596 aa15.22■□□□□ 0.03
SNX4-201ENST00000251775 MUC21A0A140T8X8 626 aa15.22■□□□□ 0.03
SNX4-201ENST00000251775 GNG5P63218 68 aa15.22■□□□□ 0.03
SNX4-201ENST00000251775 MUC21Q5SSG8 566 aa15.22■□□□□ 0.03
SNX4-201ENST00000251775 TCF24Q7RTU0 167 aa15.22■□□□□ 0.03
SNX4-201ENST00000251775 OCIAD2Q56VL3 154 aa15.22■□□□□ 0.03
SNX4-201ENST00000251775 SLC25A34Q6PIV7 304 aa15.22■□□□□ 0.03
SNX4-201ENST00000251775 HBBP68871 147 aa15.21■□□□□ 0.03
SNX4-201ENST00000251775 FAM162BQ5T6X4 162 aa15.21■□□□□ 0.03
SNX4-201ENST00000251775 PATE2Q6UY27 113 aa15.21■□□□□ 0.03
SNX4-201ENST00000251775 ZNF833PQ6ZTB9 187 aa15.21■□□□□ 0.03
SNX4-201ENST00000251775 FXYD5Q96DB9 178 aa15.21■□□□□ 0.03
SNX4-201ENST00000251775 MRPL20Q9BYC9 149 aaKnown RBP15.21■□□□□ 0.03
SNX4-201ENST00000251775 GVINP1Q7Z2Y8 2422 aa15.21■□□□□ 0.03
SNX4-201ENST00000251775 SAA1P0DJI8 122 aaPredicted RBP15.21■□□□□ 0.03
SNX4-201ENST00000251775 REG1BP48304 166 aa15.21■□□□□ 0.03
SNX4-201ENST00000251775 CHCHD1Q96BP2 118 aaKnown RBP15.21■□□□□ 0.03
SNX4-201ENST00000251775 COX7A2P2O60397 106 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 LEPROTL1O95214 131 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 TMEM200BQ69YZ2 307 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 GFRALQ6UXV0 394 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 SGK494Q96LW2 274 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 JKAMPQ9P055 326 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 ARFGEF3Q5TH69 2177 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 FSTL3O95633 263 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 MYCNOSP40205 109 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 MEF2CQ06413 473 aaPredicted RBP15.2■□□□□ 0.02
SNX4-201ENST00000251775 C10orf113Q5VZT2 155 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 AMMECR1LQ6DCA0 310 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 CACNG8Q8WXS5 425 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 VPS25Q9BRG1 176 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 SCRT2Q9NQ03 307 aa15.2■□□□□ 0.02
SNX4-201ENST00000251775 CBY3A6NI87 242 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 TMEM178BH3BS89 294 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 NBL1P41271 181 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 LYPD2Q6UXB3 125 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 LINC00322Q6ZN03 302 aaPredicted RBP15.19■□□□□ 0.02
SNX4-201ENST00000251775 BSNQ9UPA5 3926 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 APC2O95996 2303 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 PKDREJQ9NTG1 2253 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 ATMQ13315 3056 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 PPIAL4EA0A075B759 164 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 PPIAL4DF5H284 164 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 PPIAL4FP0DN26 164 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 C12orf54Q6X4T0 127 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 GTSF1Q8WW33 167 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 ZNF835Q9Y2P0 537 aa15.19■□□□□ 0.02
SNX4-201ENST00000251775 DLL1O00548 723 aa15.18■□□□□ 0.02
SNX4-201ENST00000251775 CCL17Q92583 94 aa15.18■□□□□ 0.02
SNX4-201ENST00000251775 TMEM191AQ9H0A3 160 aa15.18■□□□□ 0.02
SNX4-201ENST00000251775 SPTBN2O15020 2390 aa15.18■□□□□ 0.02
SNX4-201ENST00000251775 SMG1Q96Q15 3661 aaKnown RBP15.18■□□□□ 0.02
SNX4-201ENST00000251775 PRR30Q53SZ7 412 aaPredicted RBP15.18■□□□□ 0.02
SNX4-201ENST00000251775 RPP21Q9H633 154 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms