RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-201ENST00000248139 SLC25A5P05141 298 aaKnown RBP20.45■□□□□ 0.86
RAB40C-201ENST00000248139 IGF2RP11717 2491 aa20.45■□□□□ 0.86
RAB40C-201ENST00000248139 IGHV2-26A0A0B4J1V2 119 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 A0A1W2PS18 150 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 RPL27AP46776 148 aaKnown RBP20.44■□□□□ 0.86
RAB40C-201ENST00000248139 TRBV9A0A0B4J1U6 114 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 CAMPP49913 170 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 WDR73Q6P4I2 378 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 TMEM68Q96MH6 324 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 RNF2Q99496 336 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 FBXL15Q9H469 300 aa20.44■□□□□ 0.86
RAB40C-201ENST00000248139 VSTM5A8MXK1 200 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 BRS3P32247 399 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 MC5RP33032 325 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 Q71RC1 249 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-201ENST00000248139 NUP35Q8NFH5 326 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 INSIG2Q9Y5U4 225 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 VWC2LB2RUY7 222 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 APCSP02743 223 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 NRN1Q9NPD7 142 aa20.43■□□□□ 0.86
RAB40C-201ENST00000248139 IZUMO1RA6ND01 250 aa20.42■□□□□ 0.86
RAB40C-201ENST00000248139 NTF3P20783 257 aa20.42■□□□□ 0.86
RAB40C-201ENST00000248139 ZNF137PP52743 207 aa20.42■□□□□ 0.86
RAB40C-201ENST00000248139 LINC00322Q6ZN03 302 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-201ENST00000248139 ASCL5Q7RTU5 278 aa20.42■□□□□ 0.86
RAB40C-201ENST00000248139 ZNF331Q9NQX6 463 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-201ENST00000248139 CD24P25063 80 aa20.42■□□□□ 0.86
RAB40C-201ENST00000248139 FOXC1Q12948 553 aa20.42■□□□□ 0.86
RAB40C-201ENST00000248139 KAAG1Q9UBP8 84 aa20.42■□□□□ 0.86
RAB40C-201ENST00000248139 SIGLEC9Q9Y336 463 aa20.41■□□□□ 0.86
RAB40C-201ENST00000248139 MT-ND6P03923 174 aa20.41■□□□□ 0.86
RAB40C-201ENST00000248139 TEX43Q6ZNM6 134 aa20.41■□□□□ 0.86
RAB40C-201ENST00000248139 SPACA3Q8IXA5 215 aa20.41■□□□□ 0.86
RAB40C-201ENST00000248139 EPDR1Q9UM22 224 aa20.41■□□□□ 0.86
RAB40C-201ENST00000248139 ZNF835Q9Y2P0 537 aa20.41■□□□□ 0.86
RAB40C-201ENST00000248139 NBEAP1P0C6P0 100 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 LGALS7P47929 136 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 UBE2G1P62253 170 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 TBR1Q16650 682 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 FAM71F2Q6NXP2 309 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 TCF24Q7RTU0 167 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 ASCL2Q99929 193 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 IGHV1-3A0A0C4DH29 117 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 MBD6Q96DN6 1003 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 NEU1Q99519 415 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 RALYQ9UKM9 306 aaKnown RBP20.4■□□□□ 0.86
RAB40C-201ENST00000248139 HRNRQ86YZ3 2850 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-201ENST00000248139 FAM90A27PA6NNH2 459 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 HIGD1CA8MV81 97 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 C8orf31Q8N9H6 132 aa20.4■□□□□ 0.86
RAB40C-201ENST00000248139 HLA-DQA1P01909 254 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 APOBEC3AP31941 199 aaPredicted RBP20.39■□□□□ 0.85
RAB40C-201ENST00000248139 MYCNOSP40205 109 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 Q8N976 141 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 PERPQ96FX8 193 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 IGLV1-47P01700 117 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 CRYGCP07315 174 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 RPL19P84098 196 aaKnown RBP20.39■□□□□ 0.85
RAB40C-201ENST00000248139 KCNS1Q96KK3 526 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 VAMP8Q9BV40 100 aa20.39■□□□□ 0.85
RAB40C-201ENST00000248139 TRAV8-1A0A0A6YYK1 113 aa20.38■□□□□ 0.85
RAB40C-201ENST00000248139 DIRC3C9JPN6 131 aa20.38■□□□□ 0.85
RAB40C-201ENST00000248139 LDLRAD2Q5SZI1 272 aa20.38■□□□□ 0.85
RAB40C-201ENST00000248139 BUB1B-PAK6H3BSN5 160 aa20.38■□□□□ 0.85
RAB40C-201ENST00000248139 G0S2P27469 103 aa20.38■□□□□ 0.85
RAB40C-201ENST00000248139 LYZP61626 148 aa20.38■□□□□ 0.85
RAB40C-201ENST00000248139 NUTF2P61970 127 aaKnown RBP20.38■□□□□ 0.85
RAB40C-201ENST00000248139 TSKUQ8WUA8 353 aa20.38■□□□□ 0.85
RAB40C-201ENST00000248139 M0R143 59 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 PPP1R27Q86WC6 154 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 ATOH7Q8N100 152 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 S4R3C0 116 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 HYPMO75409 117 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 CRYGBP07316 175 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 CD3EP07766 207 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 OR10J3Q5JRS4 329 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 KIR3DL3Q8N743 410 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 TEX45Q8NA69 505 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 WNT10AQ9GZT5 417 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 C7orf69Q9H7B7 122 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 NGBQ9NPG2 151 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 ZNF586Q9NXT0 402 aa20.37■□□□□ 0.85
RAB40C-201ENST00000248139 TEX22C9J3V5 150 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 TCAPO15273 167 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 LBHQ53QV2 105 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-201ENST00000248139 C18orf32Q8TCD1 76 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 COL6A6A6NMZ7 2263 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 A0A1W2PRD5 423 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 A0A1W2PRF3 423 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 A0A1W2PRM7 423 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 A6NNC1 897 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 SIAH2O43255 324 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 PLGLAQ15195 96 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 NIT1Q86X76 327 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 GRAMD2BQ96HH9 432 aa20.36■□□□□ 0.85
RAB40C-201ENST00000248139 PPIAL4CA0A0B4J2A2 164 aa20.35■□□□□ 0.85
RAB40C-201ENST00000248139 ZNF324O75467 553 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-201ENST00000248139 PPIAL4GP0DN37 164 aa20.35■□□□□ 0.85
RAB40C-201ENST00000248139 PSG1P11464 419 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms