RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 MRAP2Q96G30 205 aa16.36■□□□□ 0.21
SOX4-201ENST00000244745 LYNX1G3V0Z9 82 aa16.36■□□□□ 0.21
SOX4-201ENST00000244745 LYNX1P0DP58 116 aa16.36■□□□□ 0.21
SOX4-201ENST00000244745 IGHV4-39P01824 125 aa16.36■□□□□ 0.21
SOX4-201ENST00000244745 ESDP10768 282 aa16.36■□□□□ 0.21
SOX4-201ENST00000244745 ERVK11-1P61568 191 aa16.36■□□□□ 0.21
SOX4-201ENST00000244745 WISP1O95388 367 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 EVI2AP22794 236 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 B3GALT5-AS1P59052 145 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 C8orf46Q8TAG6 207 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 ABCA7Q8IZY2 2146 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 IGKV3OR2-268A0A0C4DH90 116 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 IGHV2-5P01817 119 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 CSRP2Q16527 193 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 NTF4P34130 210 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 TRBV6-6A0A0A6YYG2 114 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 MLNRO43193 412 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 GAGE13Q4V321 117 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 KIR3DL3Q8N743 410 aa16.35■□□□□ 0.21
SOX4-201ENST00000244745 PPIFP30405 207 aaKnown RBP16.34■□□□□ 0.21
SOX4-201ENST00000244745 MAJINQ3KP22 176 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 COX11Q9Y6N1 276 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 TCF20Q9UGU0 1960 aaKnown RBP16.34■□□□□ 0.21
SOX4-201ENST00000244745 Q6ZRM9 215 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 IFI27L1Q96BM0 104 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 A0A1B0GUS0 222 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 FOXL2NBQ6ZUU3 175 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 FABP5P3A8MUU1 101 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 RASL11AQ6T310 242 aa16.34■□□□□ 0.21
SOX4-201ENST00000244745 SRRM5B3KS81 715 aa16.33■□□□□ 0.21
SOX4-201ENST00000244745 TMEM95Q3KNT9 176 aa16.33■□□□□ 0.21
SOX4-201ENST00000244745 PAPPA-AS1Q5QFB9 102 aa16.33■□□□□ 0.21
SOX4-201ENST00000244745 HS3ST6Q96QI5 342 aa16.33■□□□□ 0.21
SOX4-201ENST00000244745 DNAL4O96015 105 aa16.33■□□□□ 0.2
SOX4-201ENST00000244745 COX6B1P14854 86 aa16.33■□□□□ 0.2
SOX4-201ENST00000244745 NEU4Q8WWR8 484 aaPredicted RBP16.33■□□□□ 0.2
SOX4-201ENST00000244745 OR9G4Q8NGQ1 327 aa16.33■□□□□ 0.2
SOX4-201ENST00000244745 GLMPQ8WWB7 406 aa16.33■□□□□ 0.2
SOX4-201ENST00000244745 GUSBP1Q15486 140 aa16.32■□□□□ 0.2
SOX4-201ENST00000244745 NPSP0C0P6 89 aa16.32■□□□□ 0.2
SOX4-201ENST00000244745 VKORC1Q9BQB6 163 aa16.32■□□□□ 0.2
SOX4-201ENST00000244745 Q6ZS49 121 aa16.32■□□□□ 0.2
SOX4-201ENST00000244745 CENPVQ7Z7K6 275 aaPredicted RBP16.32■□□□□ 0.2
SOX4-201ENST00000244745 NUP35Q8NFH5 326 aa16.32■□□□□ 0.2
SOX4-201ENST00000244745 PSMB11A5LHX3 300 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 C15orf62A8K5M9 175 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 CKS1BP61024 79 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 ASCL4Q6XD76 172 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 CHTOPQ9Y3Y2 248 aaKnown RBP16.31■□□□□ 0.2
SOX4-201ENST00000244745 IGHV3-11P01762 117 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 EXOC3-AS1Q8N2X6 119 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 RPUSD1Q9UJJ7 312 aaKnown RBP16.31■□□□□ 0.2
SOX4-201ENST00000244745 MPDZO75970 2070 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 ARHGEF17Q96PE2 2063 aaPredicted RBP16.31■□□□□ 0.2
SOX4-201ENST00000244745 RP1P56715 2156 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 TIMM23O14925 209 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 TMEM200BQ69YZ2 307 aa16.31■□□□□ 0.2
SOX4-201ENST00000244745 TRAV8-4A0A0B4J246 113 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 ZNF524Q96C55 264 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 PLXNA4Q9HCM2 1894 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 GTSCR1Q86UQ5 136 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 GTSF1LQ9H1H1 148 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 MRPL27Q9P0M9 148 aaKnown RBP16.3■□□□□ 0.2
SOX4-201ENST00000244745 TNFRSF18Q9Y5U5 241 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 SYS1-DBNDD2H3BUS1 97 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 C20orf144Q9BQM9 153 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 SLC25A2Q9BXI2 301 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 MRPS16Q9Y3D3 137 aaKnown RBP16.3■□□□□ 0.2
SOX4-201ENST00000244745 SCRT1Q9BWW7 348 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 NXT2Q9NPJ8 142 aaKnown RBP16.3■□□□□ 0.2
SOX4-201ENST00000244745 LY96Q9Y6Y9 160 aa16.3■□□□□ 0.2
SOX4-201ENST00000244745 GAGE12BA1L429 117 aa16.29■□□□□ 0.2
SOX4-201ENST00000244745 ASCL2Q99929 193 aa16.29■□□□□ 0.2
SOX4-201ENST00000244745 IGKV2-40A0A087WW87 121 aaPredicted RBP16.29■□□□□ 0.2
SOX4-201ENST00000244745 IGKV2D-40P01614 121 aaPredicted RBP16.29■□□□□ 0.2
SOX4-201ENST00000244745 SUMO2P61956 95 aaKnown RBP16.29■□□□□ 0.2
SOX4-201ENST00000244745 SRSF1Q07955 248 aaKnown RBP eCLIP16.29■□□□□ 0.2
SOX4-201ENST00000244745 PLXNA2O75051 1894 aa16.29■□□□□ 0.2
SOX4-201ENST00000244745 KNTC1P50748 2209 aa16.29■□□□□ 0.2
SOX4-201ENST00000244745 BCL6BQ8N143 479 aaPredicted RBP16.29■□□□□ 0.2
SOX4-201ENST00000244745 ANAPC10Q9UM13 185 aa16.29■□□□□ 0.2
SOX4-201ENST00000244745 MDC1Q14676 2089 aaKnown RBP16.28■□□□□ 0.2
SOX4-201ENST00000244745 PLSCR4Q9NRQ2 329 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 IGKV1-6A0A0C4DH72 117 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 ZNF815PA8K554 130 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 FXYD7P58549 80 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 KIR3DS1Q14943 382 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 JMJD8Q96S16 334 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 D6R8Y8 96 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 OR13C6PQ8NH95 151 aa16.28■□□□□ 0.2
SOX4-201ENST00000244745 A8MWV9 139 aa16.27■□□□□ 0.2
SOX4-201ENST00000244745 TMEM262E9PQX1 116 aa16.27■□□□□ 0.2
SOX4-201ENST00000244745 SLC50A1Q9BRV3 221 aa16.27■□□□□ 0.2
SOX4-201ENST00000244745 CYSLTR1Q9Y271 337 aa16.27■□□□□ 0.2
SOX4-201ENST00000244745 PMS2P5A8MQ11 134 aa16.27■□□□□ 0.2
SOX4-201ENST00000244745 HAX1O00165 279 aa16.27■□□□□ 0.2
SOX4-201ENST00000244745 PAX1P15863 534 aa16.27■□□□□ 0.2
SOX4-201ENST00000244745 GFRA3O60609 400 aa16.27■□□□□ 0.19
SOX4-201ENST00000244745 MCRIP2Q9BUT9 160 aaKnown RBP16.27■□□□□ 0.19
SOX4-201ENST00000244745 SLC25A39Q9BZJ4 359 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms