RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 KCNS1Q96KK3 526 aa17.52■□□□□ 0.4
RNF39-201ENST00000244360 LIPFP07098 398 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 GPX1P07203 203 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 FRMD6-AS1P0C7T7 363 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 RPEQ96AT9 228 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 RNF5Q99942 180 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 MIEN1Q9BRT3 115 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 CHRDL1Q9BU40 450 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 VAMP8Q9BV40 100 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 ZNF355PQ9NSJ1 428 aa17.52■□□□□ 0.39
RNF39-201ENST00000244360 C22orf46C9J442 243 aa17.51■□□□□ 0.39
RNF39-201ENST00000244360 IGHV3-48P01763 117 aa17.51■□□□□ 0.39
RNF39-201ENST00000244360 PPP1R27Q86WC6 154 aa17.51■□□□□ 0.39
RNF39-201ENST00000244360 WIPF2Q8TF74 440 aaPredicted RBP17.51■□□□□ 0.39
RNF39-201ENST00000244360 NEU1Q99519 415 aa17.51■□□□□ 0.39
RNF39-201ENST00000244360 PAXXQ9BUH6 204 aa17.51■□□□□ 0.39
RNF39-201ENST00000244360 SERTAD4Q9NUC0 356 aa17.51■□□□□ 0.39
RNF39-201ENST00000244360 HCP5Q6MZN7 132 aa17.51■□□□□ 0.39
RNF39-201ENST00000244360 TEX22C9J3V5 150 aa17.5■□□□□ 0.39
RNF39-201ENST00000244360 F2Z2F3 143 aa17.5■□□□□ 0.39
RNF39-201ENST00000244360 TMEM116Q8NCL8 245 aa17.5■□□□□ 0.39
RNF39-201ENST00000244360 TRGV9Q99603 122 aa17.5■□□□□ 0.39
RNF39-201ENST00000244360 RUSC1-AS1Q66K80 236 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 ZNF331Q9NQX6 463 aaPredicted RBP17.49■□□□□ 0.39
RNF39-201ENST00000244360 CORTO00230 105 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 CDKN1AP38936 164 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 TCL1AP56279 114 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 ZNF705AQ6ZN79 300 aaPredicted RBP17.49■□□□□ 0.39
RNF39-201ENST00000244360 STXBP6Q8NFX7 210 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 OR4B1Q8NGF8 309 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 VN1R17PQ8TDU5 208 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 TNFRSF19Q9NS68 423 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 ONECUT1Q9UBC0 465 aa17.49■□□□□ 0.39
RNF39-201ENST00000244360 PEX7O00628 323 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 PLXNB1O43157 2135 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 SPINK4O60575 86 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 ZNF329Q86UD4 541 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 TIMD4Q96H15 378 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 F11RQ9Y624 299 aaKnown RBP17.48■□□□□ 0.39
RNF39-201ENST00000244360 TPRP12270 2363 aaKnown RBP17.48■□□□□ 0.39
RNF39-201ENST00000244360 BMPR1BO00238 502 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 ZNF253O75346 499 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 LY6HO94772 140 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 APCSP02743 223 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 NEU4Q8WWR8 484 aaPredicted RBP17.48■□□□□ 0.39
RNF39-201ENST00000244360 GRAMD2BQ96HH9 432 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 TBL2Q9Y4P3 447 aaKnown RBP17.48■□□□□ 0.39
RNF39-201ENST00000244360 ABCA4P78363 2273 aa17.48■□□□□ 0.39
RNF39-201ENST00000244360 CD33P20138 364 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 AMTP48728 403 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 LDLRAD2Q5SZI1 272 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 MRPL54Q6P161 138 aaKnown RBP17.47■□□□□ 0.39
RNF39-201ENST00000244360 OR11H6Q8NGC7 330 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 C22orf15Q8WYQ4 148 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 FXYD5Q96DB9 178 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 MBD6Q96DN6 1003 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 SMIM12Q96EX1 92 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 FBXL7Q9UJT9 491 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 PYYP10082 97 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 SRIP30626 198 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 C19orf35Q6ZS72 473 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 FBXL15Q9H469 300 aa17.47■□□□□ 0.39
RNF39-201ENST00000244360 MRPL27Q9P0M9 148 aaKnown RBP17.47■□□□□ 0.39
RNF39-201ENST00000244360 SRSF8Q9BRL6 282 aaKnown RBP17.46■□□□□ 0.39
RNF39-201ENST00000244360 NRN1Q9NPD7 142 aa17.46■□□□□ 0.39
RNF39-201ENST00000244360 A0A1W2PS18 150 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 ZNF324O75467 553 aaPredicted RBP17.45■□□□□ 0.38
RNF39-201ENST00000244360 MOSP00540 346 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 SLC35B1P78383 322 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 LINC00305Q7Z4B0 112 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 PAM16Q9Y3D7 125 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 M0R1W7 72 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 KRTDAPP60985 99 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 KIAA1644Q3SXP7 199 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 SRSF12Q8WXF0 261 aaKnown RBP17.45■□□□□ 0.38
RNF39-201ENST00000244360 PERPQ96FX8 193 aa17.45■□□□□ 0.38
RNF39-201ENST00000244360 FAM103A1Q9BTL3 118 aaKnown RBP17.45■□□□□ 0.38
RNF39-201ENST00000244360 ATRXP46100 2492 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 DIRC3C9JPN6 131 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 TIMM23O14925 209 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 PLP1P60201 277 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 DTX2Q86UW9 622 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 HIST1H1EP10412 219 aaKnown RBP17.44■□□□□ 0.38
RNF39-201ENST00000244360 HTR1DP28221 377 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 MYCNOSP40205 109 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 DPM3Q9P2X0 92 aa17.44■□□□□ 0.38
RNF39-201ENST00000244360 APELAP0DMC3 54 aa17.43■□□□□ 0.38
RNF39-201ENST00000244360 TDRG1Q3Y452 100 aa17.43■□□□□ 0.38
RNF39-201ENST00000244360 TMEM68Q96MH6 324 aa17.43■□□□□ 0.38
RNF39-201ENST00000244360 ODF3BA8MYP8 253 aa17.43■□□□□ 0.38
RNF39-201ENST00000244360 RPLP1P05386 114 aaKnown RBP17.43■□□□□ 0.38
RNF39-201ENST00000244360 NHLRC2Q8NBF2 726 aa17.43■□□□□ 0.38
RNF39-201ENST00000244360 CFHR4Q92496 578 aa17.43■□□□□ 0.38
RNF39-201ENST00000244360 RCHY1Q96PM5 261 aa17.43■□□□□ 0.38
RNF39-201ENST00000244360 ARF6P62330 175 aa17.42■□□□□ 0.38
RNF39-201ENST00000244360 Q8N976 141 aa17.42■□□□□ 0.38
RNF39-201ENST00000244360 LINC00479Q96M42 142 aa17.42■□□□□ 0.38
RNF39-201ENST00000244360 ATG101Q9BSB4 218 aa17.42■□□□□ 0.38
RNF39-201ENST00000244360 SSBP3Q9BWW4 388 aaPredicted RBP17.42■□□□□ 0.38
RNF39-201ENST00000244360 LOC105371242A0A075B767 164 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms