RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 RD3LP0DJH9 198 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 C15orf32Q32M92 178 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 SOHLH1Q5JUK2 328 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 SVBPQ8N300 66 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 NECAP1Q8NC96 275 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 OR1B1Q8NGR6 318 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 TXN2Q99757 166 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 VPREB3Q9UKI3 123 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 ACANP16112 2415 aa11.88□□□□□ -0.51
HDHD3-201ENST00000238379 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 HYPMO75409 117 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 IGHV3-23P01764 117 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 FABP1P07148 127 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
HDHD3-201ENST00000238379 TAS2R45P59539 299 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
HDHD3-201ENST00000238379 Q56UQ5 140 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 IL17RELQ6ZVW7 336 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 NOL4LQ96MY1 436 aaPredicted RBP11.87□□□□□ -0.51
HDHD3-201ENST00000238379 SLC25A2Q9BXI2 301 aa11.87□□□□□ -0.51
HDHD3-201ENST00000238379 MYO9AB2RTY4 2548 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 AP4M1O00189 453 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 HOXA3O43365 443 aaPredicted RBP11.86□□□□□ -0.51
HDHD3-201ENST00000238379 CD5LO43866 347 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 TOMM40O96008 361 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 CTSGP08311 255 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 LINC00305Q7Z4B0 112 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 OR51G1Q8NGK1 321 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 NOTCH2Q04721 2471 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
HDHD3-201ENST00000238379 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
HDHD3-201ENST00000238379 OR7C2O60412 319 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 NDUFS6O75380 124 aaKnown RBP11.86□□□□□ -0.51
HDHD3-201ENST00000238379 BRI3O95415 125 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 UBE2G2P60604 165 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 SUN5Q8TC36 379 aa11.86□□□□□ -0.51
HDHD3-201ENST00000238379 OR2T8A6NH00 312 aa11.85□□□□□ -0.51
HDHD3-201ENST00000238379 CEBPGP53567 150 aa11.85□□□□□ -0.51
HDHD3-201ENST00000238379 LYZP61626 148 aa11.85□□□□□ -0.51
HDHD3-201ENST00000238379 FAM90A2PQ658T7 463 aa11.85□□□□□ -0.51
HDHD3-201ENST00000238379 ZNF491Q8N8L2 437 aa11.85□□□□□ -0.51
HDHD3-201ENST00000238379 OR5AU1Q8NGC0 362 aa11.85□□□□□ -0.51
HDHD3-201ENST00000238379 MRPL27Q9P0M9 148 aaKnown RBP11.85□□□□□ -0.51
HDHD3-201ENST00000238379 ZNF580Q9UK33 172 aa11.85□□□□□ -0.51
HDHD3-201ENST00000238379 ZFHX3Q15911 3703 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 WI2-2373I1.2A0A1W2PRP0 233 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 C11orf94C9JXX5 98 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 TMEM250H0YL14 139 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 ADMP35318 185 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 ATP5G3P48201 142 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 OR4F5Q8NH21 305 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 CCDC140Q96MF4 163 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 OR4F4Q96R69 305 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 CHRDL1Q9BU40 450 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 TMEM167BQ9NRX6 74 aa11.84□□□□□ -0.51
HDHD3-201ENST00000238379 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
HDHD3-201ENST00000238379 FAM74A7A6NL05 159 aa11.83□□□□□ -0.51
HDHD3-201ENST00000238379 SNAPINO95295 136 aa11.83□□□□□ -0.51
HDHD3-201ENST00000238379 OR2C1O95371 312 aa11.83□□□□□ -0.51
HDHD3-201ENST00000238379 OR10J4P0C629 311 aa11.83□□□□□ -0.51
HDHD3-201ENST00000238379 CST9LP1Q5W188 147 aa11.83□□□□□ -0.51
HDHD3-201ENST00000238379 Q8WTZ3 238 aa11.83□□□□□ -0.51
HDHD3-201ENST00000238379 NKX6-2Q9C056 277 aaPredicted RBP11.83□□□□□ -0.51
HDHD3-201ENST00000238379 HIGD1AQ9Y241 93 aa11.83□□□□□ -0.51
HDHD3-201ENST00000238379 FAM223BA6NKX1 122 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 H3BUA1 57 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 CLEC3BP05452 202 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 CFHR3Q02985 330 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 KIAA0141Q14154 515 aaPredicted RBP11.83□□□□□ -0.52
HDHD3-201ENST00000238379 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 CLRN3Q8NCR9 226 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 EEF1AKMT3Q96AZ1 226 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 RNF125Q96EQ8 232 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 ZNF414Q96IQ9 312 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 ARL2-SNX15V9GYD0 113 aa11.83□□□□□ -0.52
HDHD3-201ENST00000238379 TRBV7-1A0A0A6YYK4 115 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 NUPL2O15504 423 aaKnown RBP11.82□□□□□ -0.52
HDHD3-201ENST00000238379 IGLV1-40P01703 118 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 TRGV3P03979 118 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 IL4P05112 153 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 PYYP10082 97 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 GPR183P32249 361 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 SRP14P37108 136 aaKnown RBP11.82□□□□□ -0.52
HDHD3-201ENST00000238379 ATP5G2Q06055 141 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 PAXXQ9BUH6 204 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 SLC25A39Q9BZJ4 359 aaPredicted RBP11.82□□□□□ -0.52
HDHD3-201ENST00000238379 OR51M1Q9H341 326 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 YAE1D1Q9NRH1 226 aa11.82□□□□□ -0.52
HDHD3-201ENST00000238379 GAR1Q9NY12 217 aaKnown RBP11.82□□□□□ -0.52
HDHD3-201ENST00000238379 H3BQ15 152 aa11.81□□□□□ -0.52
HDHD3-201ENST00000238379 PDE6DO43924 150 aa11.81□□□□□ -0.52
HDHD3-201ENST00000238379 SCGB2A1O75556 95 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms