RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CAV2P51636 162 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 PAFAH1B2P68402 229 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 AKR1C1Q04828 323 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 OR8G2PQ6IF36 304 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 TMEM14EPQ6UXP3 125 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 ADAMTSL5Q6ZMM2 481 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 HAPLN4Q86UW8 402 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 OR51G1Q8NGK1 321 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
SF3B6-201ENST00000233468 RHPN1-AS1Q9BWJ2 59 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 MRPL36Q9P0J6 103 aaKnown RBP8.52□□□□□ -1.05
SF3B6-201ENST00000233468 MLXQ9UH92 298 aa8.52□□□□□ -1.05
SF3B6-201ENST00000233468 IGHV3OR16-8A0A075B7F1 116 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 SMCO3A2RU48 225 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 CHEK1O14757 476 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 ZNF207O43670 478 aaKnown RBP8.51□□□□□ -1.05
SF3B6-201ENST00000233468 METTL15P1P0C7V9 234 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 PAX9P55771 341 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 CMC4P56277 68 aaPredicted RBP8.51□□□□□ -1.05
SF3B6-201ENST00000233468 DLK1P80370 383 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 ACOT7LQ6ZUV0 252 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 TMEM144Q7Z5S9 345 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 S100A7AQ86SG5 101 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 STX12Q86Y82 276 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 CITED4Q96RK1 184 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 TRGV9Q99603 122 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 NPVFQ9HCQ7 196 aa8.51□□□□□ -1.05
SF3B6-201ENST00000233468 OR4C46A6NHA9 309 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 PRSS46E5RG02 174 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 E5RGE8 158 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 TSPAN4O14817 238 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 DEDDO75618 318 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 IL4P05112 153 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 HNRNPCP07910 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
SF3B6-201ENST00000233468 PSG1P11464 419 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 CRYBB3P26998 211 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 AP2S1P53680 142 aaPredicted RBP8.5□□□□□ -1.05
SF3B6-201ENST00000233468 HBG1P69891 147 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 HBG2P69892 147 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 IL15RAQ13261 267 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 RAB32Q13637 225 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 TMEM61Q8N0U2 210 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 THAP8Q8NA92 274 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 BPIFCQ8NFQ6 507 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 SLC25A31Q9H0C2 315 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 MED28Q9H204 178 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 LYRM2Q9NU23 88 aaPredicted RBP8.5□□□□□ -1.05
SF3B6-201ENST00000233468 RABAC1Q9UI14 185 aa8.5□□□□□ -1.05
SF3B6-201ENST00000233468 LSM4Q9Y4Z0 139 aaKnown RBP8.5□□□□□ -1.05
SF3B6-201ENST00000233468 HELTA6NFD8 242 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 ZNF785A8K8V0 405 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 S100A11P31949 105 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 SULT1A1P50225 295 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 CD81P60033 236 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 SELENOTP62341 195 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 RAB31Q13636 194 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 ATP6V1FQ16864 119 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 Q8N3U1 123 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 ASB13Q8WXK3 278 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 RNF125Q96EQ8 232 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 WDR89Q96FK6 387 aaPredicted RBP8.49□□□□□ -1.05
SF3B6-201ENST00000233468 VSIRQ9H7M9 311 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 TUBA4BQ9H853 241 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 RNF24Q9Y225 148 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 ALG5Q9Y673 324 aa8.49□□□□□ -1.05
SF3B6-201ENST00000233468 IZUMO1RA6ND01 250 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 PMS2P5A8MQ11 134 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 DNASE2O00115 360 aaPredicted RBP8.48□□□□□ -1.05
SF3B6-201ENST00000233468 SIX6O95475 246 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 EDN2P20800 178 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 P2RY1P47900 373 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 RRAS2P62070 204 aaPredicted RBP8.48□□□□□ -1.05
SF3B6-201ENST00000233468 RPL11P62913 178 aaKnown RBP8.48□□□□□ -1.05
SF3B6-201ENST00000233468 ZNF90Q03938 601 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 TEPPQ6URK8 271 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 TCF24Q7RTU0 167 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 LILRB2Q8N423 598 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 PPP1R1CQ8WVI7 109 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 RNF2Q99496 336 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 NEURL2Q9BR09 285 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 PBDC1Q9BVG4 233 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 SLC45A2Q9UMX9 530 aa8.48□□□□□ -1.05
SF3B6-201ENST00000233468 IGKV1D-37A0A075B6S9 117 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 IGHV3-49A0A0A0MS15 119 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 TRAV2A0A0B4J234 112 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 FAM24AA6NFZ4 105 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 A8MZ25 164 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 H2BFSP57053 126 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 LYZP61626 148 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 BAXQ07812 192 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 SLC38A11Q08AI6 406 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 OXA1LQ15070 435 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 LRRC37A5PQ49AS3 106 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 TMEM252Q8N6L7 170 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 TMEM217Q8N7C4 229 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 ST8SIA2Q92186 375 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 PPP1R14BQ96C90 147 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
SF3B6-201ENST00000233468 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms