RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 LINC01548A6NM66 108 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 SEC14L6B5MCN3 397 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 LINC01619G3V211 115 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 G3V318 75 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 K7EPK0 472 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 WRBO00258 174 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 TAAR5O14804 337 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 RAMP3O60896 148 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 DEDDO75618 318 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 ATG12O94817 140 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 HRASP01112 189 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 TRGV3P03979 118 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 IFNA4P05014 189 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 LGALS1P09382 135 aaKnown RBP4.4□□□□□ -1.71
AFP-201ENST00000226359 TPT1P13693 172 aaKnown RBP4.4□□□□□ -1.71
AFP-201ENST00000226359 RPL12P30050 165 aaKnown RBP4.4□□□□□ -1.71
AFP-201ENST00000226359 DUTP33316 252 aaKnown RBP4.4□□□□□ -1.71
AFP-201ENST00000226359 TAGLN2P37802 199 aaKnown RBP4.4□□□□□ -1.71
AFP-201ENST00000226359 NKX2-1P43699 371 aaPredicted RBP4.4□□□□□ -1.71
AFP-201ENST00000226359 RAB9AP51151 201 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 INSL3P51460 131 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 UBE2KP61086 200 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 ERVK-16P61578 105 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 RUNX1Q01196 453 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 IL15RAQ13261 267 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 AKIRIN2Q53H80 203 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 SLC24A4Q8NFF2 622 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 BPIFCQ8NFQ6 507 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 CD300LFQ8TDQ1 290 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 AQP10Q96PS8 301 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 OR5B12Q96R08 314 aa4.4□□□□□ -1.71
AFP-201ENST00000226359 RCL1Q9Y2P8 373 aaKnown RBP4.4□□□□□ -1.71
AFP-201ENST00000226359 OVOL1O14753 267 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 IGKV1-16P04430 117 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 S100A6P06703 90 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 AKR1C2P52895 323 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 NDPQ00604 133 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 DEFB136Q30KP8 78 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 DEFB121Q5J5C9 76 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 ZNF491Q8N8L2 437 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 OR11H1Q8NG94 326 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 LINC00476Q8WZB0 136 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 P2RX4Q99571 388 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 MAP6D1Q9H9H5 199 aa4.39□□□□□ -1.71
AFP-201ENST00000226359 A0A1B0GU03 582 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 LINC00587B1AMM8 73 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 PRB2P02812 416 aaPredicted RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 HSPB1P04792 205 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 S100A9P06702 114 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 FABP1P07148 127 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 HOXD3P31249 432 aaPredicted RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 MAS1LP35410 378 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 LPAR6P43657 344 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 P2RY1P47900 373 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 PRSS8Q16651 343 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 OR2B11Q5JQS5 317 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 PIK3CD-AS1Q5SR53 167 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 EIF5AL1Q6IS14 154 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 C18orf65Q6ZTR6 163 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 ZNF429Q86V71 674 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 LFNGQ8NES3 379 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 OR4D5Q8NGN0 318 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 OR4A5Q8NH83 315 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 MYOZ3Q8TDC0 251 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 LSM10Q969L4 123 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 GPR146Q96CH1 333 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 PHYHIPLQ96FC7 376 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 NARS2Q96I59 477 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 USMG5Q96IX5 58 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 DUX3Q96PT4 197 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 OR4C12Q96R67 309 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 FAM103A1Q9BTL3 118 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 SLC25A31Q9H0C2 315 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 GNB4Q9HAV0 340 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 BORCS7-ASMTA0A0B4J1R7 106 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 MSGN1A6NI15 193 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 FAM223BA6NKX1 122 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 SAP30O75446 220 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 SNAPINO95295 136 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 IGHV3-11P01762 117 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 OR9G9P0C7N8 305 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 SAA1P0DJI8 122 aaPredicted RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 SLC25A6P12236 298 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 RPL27AP46776 148 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 RELQ04864 619 aaPredicted RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 UQCC3Q6UW78 93 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 FAM223AQ8IWN6 122 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 BAP18Q8IXM2 172 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 OR5T1Q8NG75 326 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 OR4A16Q8NH70 328 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 STOML3Q8TAV4 291 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 SRSF12Q8WXF0 261 aaKnown RBP4.38□□□□□ -1.71
AFP-201ENST00000226359 TPPP3Q9BW30 176 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 SMIM3Q9BZL3 60 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 WNK1Q9H4A3 2382 aa4.38□□□□□ -1.71
AFP-201ENST00000226359 A0A087X0K7 114 aa4.37□□□□□ -1.71
AFP-201ENST00000226359 A0A0U1RRA0 63 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms