RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SLC35B1P78383 322 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 FAM231DQ6ZW35 169 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 ZNF329Q86UD4 541 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 BMPR1BO00238 502 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 PYYP10082 97 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 C22orf15Q8WYQ4 148 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 MBD6Q96DN6 1003 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 LINC00479Q96M42 142 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 SERTAD4Q9NUC0 356 aa17.76■□□□□ 0.43
CCDC9-201ENST00000221922 TCAPO15273 167 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 TNXAQ16473 311 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 TMEM183BQ1AE95 376 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 WIPF2Q8TF74 440 aaPredicted RBP17.75■□□□□ 0.43
CCDC9-201ENST00000221922 RPEQ96AT9 228 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 MIEN1Q9BRT3 115 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 FBXL7Q9UJT9 491 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 SIGLEC9Q9Y336 463 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 KIAA1644Q3SXP7 199 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 MRPL54Q6P161 138 aaKnown RBP17.75■□□□□ 0.43
CCDC9-201ENST00000221922 RASL11AQ6T310 242 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 VN1R17PQ8TDU5 208 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 NEU4Q8WWR8 484 aaPredicted RBP17.75■□□□□ 0.43
CCDC9-201ENST00000221922 FXYD5Q96DB9 178 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 KCNS1Q96KK3 526 aa17.75■□□□□ 0.43
CCDC9-201ENST00000221922 CORTO00230 105 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 PEX7O00628 323 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 REG1AP05451 166 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 LIPFP07098 398 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 CRYGCP07315 174 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 FAM168AQ92567 244 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 TIMD4Q96H15 378 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 RNF5Q99942 180 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 ZNF586Q9NXT0 402 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 CACNA1AO00555 2505 aa17.74■□□□□ 0.43
CCDC9-201ENST00000221922 A0A1W2PS18 150 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 COX7A1P24310 79 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 MYCNOSP40205 109 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 Q8N976 141 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 NHLRC2Q8NBF2 726 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 LY6G5BQ8NDX9 201 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 MRPL36Q9P0J6 103 aaKnown RBP17.73■□□□□ 0.43
CCDC9-201ENST00000221922 RNF114Q9Y508 228 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 SRIP30626 198 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 RCHY1Q96PM5 261 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 VAMP8Q9BV40 100 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 TBL2Q9Y4P3 447 aaKnown RBP17.73■□□□□ 0.43
CCDC9-201ENST00000221922 PLXNB1O43157 2135 aa17.73■□□□□ 0.43
CCDC9-201ENST00000221922 M0QZK8 103 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 ZNF253O75346 499 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 CA1P00915 261 aaPredicted RBP17.72■□□□□ 0.43
CCDC9-201ENST00000221922 APCSP02743 223 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 DLX1P56177 255 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 PAX2Q02962 417 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 DTX2Q86UW9 622 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 PPP1R27Q86WC6 154 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 CHD8Q9HCK8 2581 aa17.72■□□□□ 0.43
CCDC9-201ENST00000221922 CNTFRP26992 372 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 HCP5Q6MZN7 132 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 ZNF705AQ6ZN79 300 aaPredicted RBP17.71■□□□□ 0.43
CCDC9-201ENST00000221922 TRGV9Q99603 122 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 ATG101Q9BSB4 218 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 NRN1Q9NPD7 142 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 ZNF331Q9NQX6 463 aaPredicted RBP17.71■□□□□ 0.43
CCDC9-201ENST00000221922 TNFRSF19Q9NS68 423 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 ONECUT1Q9UBC0 465 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 NBASA2RRP1 2371 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 GRAMD2BQ96HH9 432 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 FAM103A1Q9BTL3 118 aaKnown RBP17.71■□□□□ 0.43
CCDC9-201ENST00000221922 ABCA4P78363 2273 aa17.71■□□□□ 0.43
CCDC9-201ENST00000221922 LY6LH3BQJ8 138 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 LY6HO94772 140 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 IGHV3-48P01763 117 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 AMTP48728 403 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 LINC00305Q7Z4B0 112 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 PAM16Q9Y3D7 125 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 ZNF324O75467 553 aaPredicted RBP17.7■□□□□ 0.42
CCDC9-201ENST00000221922 NUDT10Q8NFP7 164 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 STXBP6Q8NFX7 210 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 NUDT11Q96G61 164 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 SSBP3Q9BWW4 388 aaPredicted RBP17.7■□□□□ 0.42
CCDC9-201ENST00000221922 C7orf69Q9H7B7 122 aa17.7■□□□□ 0.42
CCDC9-201ENST00000221922 TRAV34A0A0B4J273 112 aa17.69■□□□□ 0.42
CCDC9-201ENST00000221922 KRTDAPP60985 99 aa17.69■□□□□ 0.42
CCDC9-201ENST00000221922 PRB3Q04118 309 aaPredicted RBP17.69■□□□□ 0.42
CCDC9-201ENST00000221922 TMEM116Q8NCL8 245 aa17.69■□□□□ 0.42
CCDC9-201ENST00000221922 PERPQ96FX8 193 aa17.69■□□□□ 0.42
CCDC9-201ENST00000221922 TPRP12270 2363 aaKnown RBP17.68■□□□□ 0.42
CCDC9-201ENST00000221922 C22orf46C9J442 243 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 DIRC3C9JPN6 131 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 MFAP2P55001 183 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 SLAQ13239 276 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 OR4B1Q8NGF8 309 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 CHRDL1Q9BU40 450 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 MRPL27Q9P0M9 148 aaKnown RBP17.68■□□□□ 0.42
CCDC9-201ENST00000221922 F11RQ9Y624 299 aaKnown RBP17.68■□□□□ 0.42
CCDC9-201ENST00000221922 NUP35Q8NFH5 326 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 SRSF8Q9BRL6 282 aaKnown RBP17.68■□□□□ 0.42
CCDC9-201ENST00000221922 KLF12Q9Y4X4 402 aa17.68■□□□□ 0.42
CCDC9-201ENST00000221922 TSKUQ8WUA8 353 aa17.67■□□□□ 0.42
CCDC9-201ENST00000221922 SMIM12Q96EX1 92 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms