RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 HINT2Q9BX68 163 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 PPIAL4AQ9Y536 164 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 SLC25A15Q9Y619 301 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 INTS1Q8N201 2190 aaKnown RBP12.89□□□□□ -0.35
SF3A2-201ENST00000221494 TRAV34A0A0B4J273 112 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 MYCNOSP40205 109 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 HBBP68871 147 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 ERHP84090 104 aaKnown RBP12.89□□□□□ -0.35
SF3A2-201ENST00000221494 Q56UQ5 140 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 RNASEKQ6P5S7 137 aaKnown RBP12.89□□□□□ -0.35
SF3A2-201ENST00000221494 PET117Q6UWS5 81 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 OR2Z1Q8NG97 314 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 OR9G1Q8NH87 305 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 ZNF355PQ9NSJ1 428 aa12.89□□□□□ -0.35
SF3A2-201ENST00000221494 LOC105371242A0A075B767 164 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 COX7A2P2O60397 106 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 CRYGCP07315 174 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 HOXA4Q00056 320 aaPredicted RBP12.88□□□□□ -0.35
SF3A2-201ENST00000221494 C12orf54Q6X4T0 127 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 SLC25A48Q6ZT89 311 aaKnown RBP12.88□□□□□ -0.35
SF3A2-201ENST00000221494 LYG1Q8N1E2 194 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 THAP8Q8NA92 274 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 FAM168AQ92567 244 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 ZNF479Q96JC4 524 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 MS4A6AQ9H2W1 248 aa12.88□□□□□ -0.35
SF3A2-201ENST00000221494 ZNF430Q9H8G1 570 aaPredicted RBP12.88□□□□□ -0.35
SF3A2-201ENST00000221494 ATRXP46100 2492 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 A8MWL6 223 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 IGHV3-13P01766 116 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 GATA4P43694 442 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 TIMM23BQ5SRD1 257 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 C10orf113Q5VZT2 155 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 PLPPR2Q96GM1 343 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 TMEM191AQ9H0A3 160 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 NDUFA4L2Q9NRX3 87 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 IGHV1-18A0A0C4DH31 117 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 HIGD1CA8MV81 97 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 FAM27E3Q08E93 113 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 FAM120AOSQ5T036 256 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 ATOH7Q8N100 152 aa12.87□□□□□ -0.35
SF3A2-201ENST00000221494 TCRBV4S1A1TA0A5B7 111 aa12.86□□□□□ -0.35
SF3A2-201ENST00000221494 OR4C46A6NHA9 309 aa12.86□□□□□ -0.35
SF3A2-201ENST00000221494 CA1P00915 261 aaPredicted RBP12.86□□□□□ -0.35
SF3A2-201ENST00000221494 SUB1P53999 127 aaKnown RBP eCLIP12.86□□□□□ -0.35
SF3A2-201ENST00000221494 RPL8P62917 257 aaKnown RBP12.86□□□□□ -0.35
SF3A2-201ENST00000221494 TMEM108Q6UXF1 575 aa12.86□□□□□ -0.35
SF3A2-201ENST00000221494 ZNRF1Q8ND25 227 aa12.86□□□□□ -0.35
SF3A2-201ENST00000221494 FXYD5Q96DB9 178 aa12.86□□□□□ -0.35
SF3A2-201ENST00000221494 PMCHL2Q9BQD1 86 aa12.86□□□□□ -0.35
SF3A2-201ENST00000221494 SSBP3Q9BWW4 388 aaPredicted RBP12.86□□□□□ -0.35
SF3A2-201ENST00000221494 RPP21Q9H633 154 aaKnown RBP12.86□□□□□ -0.35
SF3A2-201ENST00000221494 NBEAQ8NFP9 2946 aa12.86□□□□□ -0.35
SF3A2-201ENST00000221494 SYS1-DBNDD2H3BUS1 97 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 TOX4O94842 621 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 NBEAP1P0C6P0 100 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 CT45A6P0DMU7 189 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 CT45A5P0DMU8 189 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 CT45A7P0DMV0 189 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 LY6DQ14210 128 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 ZNF833PQ6ZTB9 187 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 GPR82Q96P67 336 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 VKORC1Q9BQB6 163 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 PRSS22Q9GZN4 317 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 JKAMPQ9P055 326 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 RPUSD1Q9UJJ7 312 aaKnown RBP12.85□□□□□ -0.35
SF3A2-201ENST00000221494 APOA2P02652 100 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 LIPFP07098 398 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 GATA2P23769 480 aaPredicted RBP12.85□□□□□ -0.35
SF3A2-201ENST00000221494 FAM71F2Q6NXP2 309 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 SLC25A34Q6PIV7 304 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 MOB3BQ86TA1 216 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 VSTM2AQ8TAG5 236 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 FMC1Q96HJ9 113 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 EPDR1Q9UM22 224 aa12.85□□□□□ -0.35
SF3A2-201ENST00000221494 B9A039 149 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 SAA1P0DJI8 122 aaPredicted RBP12.84□□□□□ -0.35
SF3A2-201ENST00000221494 TMEM177Q53S58 311 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 PERPQ96FX8 193 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 URB1-AS1Q96HZ7 61 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 MLST8Q9BVC4 326 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 FZR1Q9UM11 496 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 PKD1L2Q7Z442 2459 aa12.84□□□□□ -0.35
SF3A2-201ENST00000221494 IGHV3OR15-7A0A075B7D8 119 aa12.83□□□□□ -0.35
SF3A2-201ENST00000221494 FSTL3O95633 263 aa12.83□□□□□ -0.35
SF3A2-201ENST00000221494 MYOD1P15172 320 aa12.83□□□□□ -0.35
SF3A2-201ENST00000221494 SCGB2A2Q13296 93 aa12.83□□□□□ -0.35
SF3A2-201ENST00000221494 PDPNQ86YL7 162 aa12.83□□□□□ -0.35
SF3A2-201ENST00000221494 RND1Q92730 232 aa12.83□□□□□ -0.35
SF3A2-201ENST00000221494 ZGRF1Q86YA3 2104 aa12.83□□□□□ -0.36
SF3A2-201ENST00000221494 LEPROTL1O95214 131 aa12.83□□□□□ -0.36
SF3A2-201ENST00000221494 VAMP3Q15836 100 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms