RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SMIM6P0DI80 62 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 NPPCP23582 126 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 BPIFB3P59826 476 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 FABP9Q0Z7S8 132 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 SGMS2Q8NHU3 365 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 C22orf15Q8WYQ4 148 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 SEPSECSQ9HD40 501 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 MDFIC2A0A1B0GVS7 189 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 TCRBV4S1A1TA0A5B7 111 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 K7EIM0 57 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 ATP6V0E1O15342 81 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 ZNF90Q03938 601 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 LY6EQ16553 131 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 CIARTQ8N365 385 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 FANCD2OSQ96PS1 177 aa15.49■□□□□ 0.07
TNFRSF1A-201ENST00000162749 FSHBP01225 129 aa15.48■□□□□ 0.07
TNFRSF1A-201ENST00000162749 RPL23P62829 140 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-201ENST00000162749 BCL6BQ8N143 479 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-201ENST00000162749 IGLV11-55A0A075B6I3 123 aa15.48■□□□□ 0.07
TNFRSF1A-201ENST00000162749 LINC01548A6NM66 108 aa15.48■□□□□ 0.07
TNFRSF1A-201ENST00000162749 ADIRFQ15847 76 aa15.48■□□□□ 0.07
TNFRSF1A-201ENST00000162749 A6NDX4 124 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 C11orf94C9JXX5 98 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 CYB5R2Q6BCY4 276 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 OR5T1Q8NG75 326 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 TMUB1Q9BVT8 246 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 AP4M1O00189 453 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 S100A9P06702 114 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 STAG3L2P0CL84 134 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 STAG3L3P0CL85 134 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 CTDSP1Q9GZU7 261 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 TNFRSF19Q9NS68 423 aa15.47■□□□□ 0.07
TNFRSF1A-201ENST00000162749 S100A8P05109 93 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 ATP5G3P48201 142 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 UBE2G2P60604 165 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 SELENOTP62341 195 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 RHOBP62745 196 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 ECSCRQ19T08 205 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 DEFB112Q30KQ8 113 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 SPATA31B1PQ5VZV4 182 aa15.46■□□□□ 0.07
TNFRSF1A-201ENST00000162749 PSMB11A5LHX3 300 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 ARL14EPLP0DKL9 152 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 KIAA0141Q14154 515 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 FAM78BQ5VT40 261 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 OR51G1Q8NGK1 321 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 OR4X1Q8NH49 305 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 TMEM37Q8WXS4 190 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 TRGV9Q99603 122 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 GSX1Q9H4S2 264 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 GSN-AS1Q9NRJ2 163 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 UNQ5815/PRO19632Q6UWF5 114 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 SPNS3Q6ZMD2 512 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 FAM210BQ96KR6 192 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 FOXC2Q99958 501 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 PITPNC1Q9UKF7 332 aa15.45■□□□□ 0.06
TNFRSF1A-201ENST00000162749 IGLC1P0CG04 106 aa15.44■□□□□ 0.06
TNFRSF1A-201ENST00000162749 C16orf82Q7Z2V1 217 aa15.44■□□□□ 0.06
TNFRSF1A-201ENST00000162749 TRGC2P03986 189 aa15.44■□□□□ 0.06
TNFRSF1A-201ENST00000162749 FAM110DQ8TAY7 271 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-201ENST00000162749 TRBV24-1A0A075B6N3 115 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 G3V318 75 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 CST9LP1Q5W188 147 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 C19orf24Q9BVV8 132 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 FUT9Q9Y231 359 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 CLN5O75503 358 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 CXorf1O96002 111 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 PFN1P07737 140 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 OR5G3P0C626 314 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 C9orf139Q6ZV77 190 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 MIR17HGQ75NE6 70 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 THYN1Q9P016 225 aa15.43■□□□□ 0.06
TNFRSF1A-201ENST00000162749 PDE6DO43924 150 aa15.42■□□□□ 0.06
TNFRSF1A-201ENST00000162749 IGHV4-59P01825 116 aa15.42■□□□□ 0.06
TNFRSF1A-201ENST00000162749 TMEM68Q96MH6 324 aa15.42■□□□□ 0.06
TNFRSF1A-201ENST00000162749 NIT2Q9NQR4 276 aa15.42■□□□□ 0.06
TNFRSF1A-201ENST00000162749 S4R3C0 116 aa15.42■□□□□ 0.06
TNFRSF1A-201ENST00000162749 M0QZK8 103 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 SMAD7O15105 426 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BKO60814 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 OR2J3O76001 311 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BJP06899 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BOP23527 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BBP33778 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BDP58876 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BCP62807 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST2H2BEQ16778 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BHQ93079 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BNQ99877 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 HIST1H2BMQ99879 126 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 DERL1Q9BUN8 251 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 DOK5Q9P104 306 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 MTORP42345 2549 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 IGKV1-17P01599 117 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 IER3P46695 156 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 PATE2Q6UY27 113 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 ZNF600Q6ZNG1 722 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 DNAJC4Q9NNZ3 241 aa15.41■□□□□ 0.06
TNFRSF1A-201ENST00000162749 PHOX2AO14813 284 aa15.4■□□□□ 0.06
TNFRSF1A-201ENST00000162749 NDUFB4O95168 129 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms