RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 FBLN7Q53RD9 439 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 PACRGQ96M98 296 aaPredicted RBP9.29□□□□□ -0.92
PKP2-201ENST00000070846 CDC42EP3Q9UKI2 254 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 VENTXO95231 258 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 CD7P09564 240 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 AREGP15514 252 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 TCTAP57738 103 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 KIR2DL4Q99706 377 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 SLC50A1Q9BRV3 221 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 TRAF4Q9BUZ4 470 aaPredicted RBP9.29□□□□□ -0.92
PKP2-201ENST00000070846 MYLKQ15746 1914 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 TRBV20OR9-2A0A075B6H5 130 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 OVOL3O00110 214 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 AGAP20933 346 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 SYNJ2BPP57105 145 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 C19orf35Q6ZS72 473 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 C18orf12Q96KH6 178 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 MAP1LC3CQ9BXW4 147 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 AP5S1Q9NUS5 200 aa9.29□□□□□ -0.92
PKP2-201ENST00000070846 TMEM250H0YL14 139 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 ZNF324O75467 553 aaPredicted RBP9.28□□□□□ -0.92
PKP2-201ENST00000070846 SHISA9B4DS77 424 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
PKP2-201ENST00000070846 ATP5G3P48201 142 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 HNRNPA3P51991 378 aaKnown RBP9.28□□□□□ -0.92
PKP2-201ENST00000070846 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 DEFB113Q30KQ7 82 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 FAM71F2Q6NXP2 309 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 WDR86Q86TI4 376 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 A0A1B0GWJ7 208 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 IGKV1-5P01602 117 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 GCSAMLQ5JQS6 135 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 Q8TCH9 128 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 TBX15Q96SF7 602 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 WDR83OSQ9Y284 106 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 TNFRSF18Q9Y5U5 241 aa9.28□□□□□ -0.92
PKP2-201ENST00000070846 DENND4CQ5VZ89 1909 aa9.27□□□□□ -0.92
PKP2-201ENST00000070846 NUDT3O95989 172 aa9.27□□□□□ -0.92
PKP2-201ENST00000070846 SRSF9Q13242 221 aaKnown RBP eCLIP9.27□□□□□ -0.92
PKP2-201ENST00000070846 PMS2P5A8MQ11 134 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 G3V318 75 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 H0YIZ8 118 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 MT-ND6P03923 174 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 SPSB3Q6PJ21 355 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 SCO2A0A1W2PP80 73 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 M0R3E3 92 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 HLA-DQA1P01909 254 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 RPL35AP18077 110 aaKnown RBP9.27□□□□□ -0.93
PKP2-201ENST00000070846 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.93
PKP2-201ENST00000070846 HERPUD1Q15011 391 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 Q8NA96 180 aa9.27□□□□□ -0.93
PKP2-201ENST00000070846 FAM110DQ8TAY7 271 aaPredicted RBP9.27□□□□□ -0.93
PKP2-201ENST00000070846 IGHV4-61A0A0C4DH41 118 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 DKK1O94907 266 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 BTCP35070 178 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 GNG5P63218 68 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 ZNF562Q6V9R5 426 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 OR1N2Q8NGR9 330 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 TRBV6-6A0A0A6YYG2 114 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 RNF222A6NCQ9 220 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 USMG5Q96IX5 58 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 MAP1LC3AQ9H492 121 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 KLF2Q9Y5W3 355 aaPredicted RBP9.26□□□□□ -0.93
PKP2-201ENST00000070846 F11RQ9Y624 299 aaKnown RBP9.26□□□□□ -0.93
PKP2-201ENST00000070846 LINC00862A6NCI5 91 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 C22orf46C9J442 243 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 ERVK11-1P61568 191 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 TMEM97Q5BJF2 176 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 SIGLEC15Q6ZMC9 328 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 RNF126Q9BV68 326 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 FABP5P3A8MUU1 101 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 LMO1P25800 156 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 SUPT4H1P63272 117 aaKnown RBP9.26□□□□□ -0.93
PKP2-201ENST00000070846 QRFPP83859 136 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 HSPB8Q9UJY1 196 aa9.26□□□□□ -0.93
PKP2-201ENST00000070846 NCOA6Q14686 2063 aaPredicted RBP9.25□□□□□ -0.93
PKP2-201ENST00000070846 H7C1H1 209 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 ASCL4Q6XD76 172 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 C1orf122Q6ZSJ8 110 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 BEND2Q8NDZ0 799 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 PEF1Q9UBV8 284 aaKnown RBP9.25□□□□□ -0.93
PKP2-201ENST00000070846 FAM90A9PA6NNJ1 464 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 MMP23AO75900 390 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 MLANAQ16655 118 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 TMEM249Q2WGJ8 235 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 LY6G6FQ5SQ64 297 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 TREML4Q6UXN2 200 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 PUSL1Q8N0Z8 303 aaKnown RBP9.25□□□□□ -0.93
PKP2-201ENST00000070846 NACAE9PAV3 2078 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 TRAV5A0A0B4J249 113 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 TCF21O43680 179 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 PPIFP30405 207 aaKnown RBP9.25□□□□□ -0.93
PKP2-201ENST00000070846 REC114Q7Z4M0 266 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 RHPN1-AS1Q9BWJ2 59 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 SDF2L1Q9HCN8 221 aa9.25□□□□□ -0.93
PKP2-201ENST00000070846 J3QLI3 93 aa9.24□□□□□ -0.93
PKP2-201ENST00000070846 SLC17A3O00476 420 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms