RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TOX4O94842 621 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 PSG1P11464 419 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 ZFP36P26651 326 aaKnown RBP6.56□□□□□ -1.36
VAMP3-201ENST00000054666 RPL15P61313 204 aaKnown RBP6.56□□□□□ -1.36
VAMP3-201ENST00000054666 RANP62826 216 aaKnown RBP6.56□□□□□ -1.36
VAMP3-201ENST00000054666 COA6Q5JTJ3 125 aaKnown RBP6.56□□□□□ -1.36
VAMP3-201ENST00000054666 S100A7AQ86SG5 101 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 FAM103A1Q9BTL3 118 aaKnown RBP6.56□□□□□ -1.36
VAMP3-201ENST00000054666 TRBV9A0A0B4J1U6 114 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 NBEAP1P0C6P0 100 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 RD3LP0DJH9 198 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 BAGE2Q86Y30 109 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 C5orf17Q8NAS9 161 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 HIST1H2BLQ99880 126 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 BPESC1Q9GZL8 116 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 SIRPDQ9H106 197 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
VAMP3-201ENST00000054666 GSX1Q9H4S2 264 aaPredicted RBP6.56□□□□□ -1.36
VAMP3-201ENST00000054666 SERTAD4Q9NUC0 356 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 C1RLQ9NZP8 487 aa6.56□□□□□ -1.36
VAMP3-201ENST00000054666 NPIPB5A8MRT5 1133 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 ZNF705GA8MUZ8 300 aaPredicted RBP6.55□□□□□ -1.36
VAMP3-201ENST00000054666 C19orf84I3L1E1 186 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 K7EIM0 57 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 FAM106CPP0CH98 169 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 GP9P14770 177 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 COX19Q49B96 90 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 PYY3Q5JQD4 70 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 ZNF562Q6V9R5 426 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 OR8I2Q8N0Y5 310 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 SMIM12Q96EX1 92 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 ATG101Q9BSB4 218 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 CHRDL1Q9BU40 450 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 THYN1Q9P016 225 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 EPDR1Q9UM22 224 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 RPH3ALQ9UNE2 315 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 CHD8Q9HCK8 2581 aa6.55□□□□□ -1.36
VAMP3-201ENST00000054666 TRAV30A0A087WSZ9 112 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 PGPA6NDG6 321 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 SNURFLB1AK76 121 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 HAX1O00165 279 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 GNG7O60262 68 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 GOSR1O95249 250 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 IGLV2-8P01709 118 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 MT-ND6P03923 174 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 SNRPCP09234 159 aaKnown RBP6.54□□□□□ -1.36
VAMP3-201ENST00000054666 BRS3P32247 399 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 PDLIM4P50479 330 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 UBE2E1P51965 193 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 YPEL3P61236 119 aaPredicted RBP6.54□□□□□ -1.36
VAMP3-201ENST00000054666 CX3CL1P78423 397 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 WDR73Q6P4I2 378 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 NHLRC2Q8NBF2 726 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM190Q8WZ59 177 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM18Q96B42 140 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
VAMP3-201ENST00000054666 LPAR2Q9HBW0 351 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 TRAV34A0A0B4J273 112 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 TOMM40O96008 361 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 IGKV1-17P01599 117 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 CBLN1P23435 193 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 ADMP35318 185 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 MYCNOSP40205 109 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 MFAP4P55083 255 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 GNG5P63218 68 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM183BQ1AE95 376 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 LEMD1Q68G75 181 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 ZNF600Q6ZNG1 722 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 DYNAPQ8N1N2 210 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 Q8N6K4 173 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 OR4F17Q8NGA8 305 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 IGFBPL1Q8WX77 278 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 FMC1Q96HJ9 113 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM68Q96MH6 324 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 MRPL18Q9H0U6 180 aaKnown RBP6.54□□□□□ -1.36
VAMP3-201ENST00000054666 Q9H3A6 140 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 TMEM14CQ9P0S9 112 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 RNF24Q9Y225 148 aa6.54□□□□□ -1.36
VAMP3-201ENST00000054666 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 GATCO43716 136 aaKnown RBP6.53□□□□□ -1.36
VAMP3-201ENST00000054666 AMBPP02760 352 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 HIST1H1EP10412 219 aaKnown RBP6.53□□□□□ -1.36
VAMP3-201ENST00000054666 IER3P46695 156 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 EBI3Q14213 229 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 Q56UQ5 140 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 PRR27Q6MZM9 219 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 FAM231DQ6ZW35 169 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 BPIFA4PQ86YQ2 179 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 CMTM2Q8TAZ6 248 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 RNF125Q96EQ8 232 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 LINC00479Q96M42 142 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 OTORQ9NRC9 128 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 GSN-AS1Q9NRJ2 163 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 WNK2Q9Y3S1 2297 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 ZZEF1O43149 2961 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 IL4P05112 153 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 SAA4P35542 130 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 TCL1AP56279 114 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 NDPQ00604 133 aa6.53□□□□□ -1.36
VAMP3-201ENST00000054666 DNLZQ5SXM8 178 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms