RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 GCSAMLQ5JQS6 135 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 RNFT1Q5M7Z0 435 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 BOD1L2Q8IYS8 172 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 MS4A6AQ9H2W1 248 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 ZNF462Q96JM2 2506 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 TRAV8-1A0A0A6YYK1 113 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 ZNF785A8K8V0 405 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 GCSAMQ8N6F7 178 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 SNRNP40Q96DI7 357 aaKnown RBP10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 BPTFQ12830 3046 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 IGHV3-21A0A0B4J1V1 117 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 MS4A5Q9H3V2 200 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 GTF3C1Q12789 2109 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 FAM157AC9JC47 383 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 LYL1P12980 280 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 TCF24Q7RTU0 167 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 OR52E5Q8NH55 327 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 FAM222BQ8WU58 562 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 MAP1LC3AQ9H492 121 aa10.09□□□□□ -0.79
TSPAN9-201ENST00000011898 WIPF3A6NGB9 483 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 ETV2O00321 342 aaPredicted RBP10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 IGLL1P15814 213 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 IGHV1-2P23083 117 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 HOXA4Q00056 320 aaPredicted RBP10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 MBNL3Q9NUK0 354 aaKnown RBP10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 IGKV3D-15A0A087WSY6 115 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 TRAV26-1A0A087WT03 109 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 RAMP3O60896 148 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 CD300EQ496F6 205 aaPredicted RBP10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 NMSQ5H8A3 153 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 GRAMD2BQ96HH9 432 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 IGHV3-72A0A0B4J1Y9 119 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 TEX43Q6ZNM6 134 aa10.08□□□□□ -0.8
TSPAN9-201ENST00000011898 A8MWV9 139 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 A0A1W2PS18 150 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 ANXA2RQ3ZCQ2 193 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 KHDC1LQ5JSQ8 128 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 ZNF714Q96N38 554 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 FOXC2Q99958 501 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 TMEM189A5PLL7 270 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 CEACAM3P40198 252 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 ZNF585BQ52M93 769 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 FAM201AQ5SY85 155 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 ZNF497Q6ZNH5 498 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
TSPAN9-201ENST00000011898 IGHV3-48P01763 117 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 RPL30P62888 115 aaKnown RBP10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 MEF2CQ06413 473 aaPredicted RBP10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 SLAQ13239 276 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 C1orf122Q6ZSJ8 110 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 SYS1-DBNDD2H3BUS1 97 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 DKK1O94907 266 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 TFF1P04155 84 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 CD3EP07766 207 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 HCP5Q6MZN7 132 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 NAV3Q8IVL0 2385 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 Q0VFX4 171 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 OR9G4Q8NGQ1 327 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 IQCF6A8MYZ5 107 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 FOXL2NBQ6ZUU3 175 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 PRELID3AQ96N28 172 aa10.06□□□□□ -0.8
TSPAN9-201ENST00000011898 SPAG8Q99932 426 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 IDI2-AS1Q9NZ38 188 aa10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 GLRXP35754 106 aa10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 B3GALT5-AS1P59052 145 aa10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 RASL11BQ9BPW5 248 aa10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 NCOA6Q14686 2063 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 RSPO1Q2MKA7 263 aaPredicted RBP10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 LIME1Q9H400 295 aa10.05□□□□□ -0.8
TSPAN9-201ENST00000011898 A0A1B0GUT8 65 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 J3KRW8 73 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 CRYBA4P53673 196 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 ADIPOQQ15848 244 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 ASCL4Q6XD76 172 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 IGHV2-26A0A0B4J1V2 119 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 TM4SF5O14894 197 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 RPL27AP46776 148 aaKnown RBP10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 IGF2-ASQ6U949 168 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 PSPNO60542 156 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 MGPP08493 103 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 ZNF138P52744 262 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 RBX1P62877 108 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 SRSF7Q16629 238 aaKnown RBP eCLIP10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 MIR17HGQ75NE6 70 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
TSPAN9-201ENST00000011898 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 PCSK4Q6UW60 755 aa10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 SYT8Q8NBV8 401 aa10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 AGMATQ9BSE5 352 aa10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 COL6A3P12111 3177 aa10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 IGKV1-5P01602 117 aa10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 Q0VG73 95 aa10.03□□□□□ -0.8
TSPAN9-201ENST00000011898 RAB1CQ92928 201 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms