RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Tspo2Q9CRZ8 162 aa12.8□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Ppp1r1aQ9ERT9 171 aa12.8□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 PhipQ8VDD9 1821 aaKnown RBP12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Olfr1116E9PXB8 307 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Vmn1r194J3JS27 296 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Saa1P05366 122 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Khdc1bP0C7A0 126 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Ppp1ccP63087 323 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Rasl11bQ922H7 247 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Adamtsl5D3Z689 485 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 ParlQ5XJY4 377 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Hcfc1r1Q9CYQ5 120 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 4930447A16RikQ9D5F6 132 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 TinagQ9WUR0 475 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Igkv1-132A0A0B4J1H9 120 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 H3BKT1 185 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Wnt10aP70701 417 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Cacna1fQ9JIS7 1985 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Frmpd3A0A140LIW3 1774 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Gm5157A0A087WRH8 301 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Gm13083A2AGW5 501 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Scgb2a2J3KMP9 96 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Tff3Q62395 81 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 4930474N05RikQ8BVR5 218 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Tmem97Q8VD00 176 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Olfr1413Q8VGU3 323 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Elovl1Q9JLJ5 279 aa12.79□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Lnp1A0A1B0GSK3 178 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 P01796 113 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 P01797 113 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 P01799 113 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Csrp3P50462 194 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Zfp874bQ7M6X2 447 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Aqp11Q8BHH1 271 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Tmprss11fQ8BHM9 439 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Dram1Q9DC58 238 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Ighv4-1A0A075B5R5 116 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Slc25a53A2AF28 346 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Ldlrad3A2AR95 345 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 MyocosQ3UWS6 143 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Mrpl18Q9CQL5 180 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 MmdQ9CQY7 238 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Gm38303A0A0A6YWW8 100 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Srp14P16254 110 aaKnown RBP12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Cnn1Q08091 297 aaKnown RBP12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Tmem184aQ3UFJ6 425 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Eml2Q7TNG5 649 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Wipi1Q8R3E3 446 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Q8VCE4 163 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Rab29Q91YQ1 204 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Rhebl1Q9D8T3 184 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Marf1Q8BJ34 1730 aaKnown RBP12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Olfr1189A2AV11 306 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Gm15140A2BEE3 237 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Tnfsf18Q7TS55 173 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Dusp18Q8VE01 188 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Ccdc198Q9CPZ1 294 aa12.78□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Olfr912A0A1L1SSS5 310 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Vmn1r78K7N608 313 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 BsgP18572 389 aaKnown RBP12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Ceacam10Q61400 265 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Dmrta1Q8CFG4 490 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Glrx2Q923X4 156 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 S100a4P07091 101 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Vmn1r181Q0P547 304 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Psg26Q4KL65 475 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Olfr1002Q8VFK2 318 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Olfr1440Q8VFV4 315 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Olfr632Q9EPN9 317 aa12.77□□□□□ -0.36
Pcdh20-201ENSMUST00000061628 Gm2026A2ART4 498 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Ins1P01325 108 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Ssty1P13675 232 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 FmodP50608 376 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Olfr873Q8VFJ0 319 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Cma2Q91VB1 246 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 AicdaQ9WVE0 198 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Togaram1Q6A070 1776 aaKnown RBP12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Hyal2O35632 473 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Sf3b6P59708 125 aaKnown RBP12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Fam109bQ14B98 259 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Wfdc6aQ3UW55 136 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Il31Q6EAL8 163 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 2210407C18RikQ6YI28 220 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Rbm14Q8C2Q3 669 aaKnown RBP12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 TskuQ8CBR6 354 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Plppr2Q8VCY8 343 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Dph7Q9CYU6 477 aa12.77□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Trav23A0A0G2JG17 115 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 SpxD3Z752 116 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Vmn1r149E9PWL6 307 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Vmn1r101E9Q365 307 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Vmn1r158G3UY92 307 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Defa-rs1P17533 116 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Pnliprp2P17892 482 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Mc5rP41149 325 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Cdx4Q07424 282 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Olfr279Q8VFD8 310 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Adipor1Q91VH1 375 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 Coa3Q9D2R6 108 aa12.76□□□□□ -0.37
Pcdh20-201ENSMUST00000061628 PyyQ9EPS2 98 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms