RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Zdhhc23Q5Y5T3 425 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 ZpbpQ62522 350 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Mtch2Q791V5 303 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Aadacl4Q8BM81 407 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Olfr822Q8VFU1 312 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Fkbp11Q9D1M7 201 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Acp1Q9D358 158 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Reg4Q9D8G5 157 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 PifoQ9D9W1 207 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Pus1Q9WU56 423 aa10.95□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Igkv9-123A0A140T8N8 117 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 A630023A22RikJ3QP60 199 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Ccl1P10146 92 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Meox1P32442 253 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Sssca1P56873 199 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Megf10Q6DIB5 1147 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Sulf2Q8CFG0 875 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 ApooQ9DCZ4 198 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Kcnk5Q9JK62 502 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Zfp930A0A1D5RM15 441 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Wfdc8Q4KUS1 273 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Fxyd3Q61835 88 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Wfdc21Q8BTE6 63 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Dtx2Q8R3P2 619 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Olfr803Q8VFI3 308 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Mgst1Q91VS7 155 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Olfr959Q9EQ86 311 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Trav12-1A0N8R1 115 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 MpzP27573 248 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Smim9Q3V0X1 137 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Oxgr1Q6IYF8 337 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 SowahbQ8BZW2 760 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Gltpd2Q8K0R6 321 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 HeylQ9DBX7 326 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Tbx21Q9JKD8 530 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 DeddQ9Z1L3 318 aa10.94□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Unc80Q8BLN6 3261 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Zfp109A0A0U1RPC5 652 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Gm14408E9Q6B9 136 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Gm10665K7N6B7 321 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Vmn1r128L7N2B4 307 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 PtcraP0C6B2 199 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 MdkP12025 140 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Lgals3P16110 264 aaKnown RBP10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 BsgP18572 389 aaKnown RBP10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Wfdc9Q3UW41 83 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Olfr1392Q8VFA6 311 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Trbv15A0A0A6YYE3 115 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 D830044I16RikA0A1D5RM53 117 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Kdf1A2A9F4 397 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Degs1O09005 323 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Zfp36l2P23949 484 aaKnown RBP10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Dppa1Q810Y7 116 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 PirtQ8BFY0 135 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Plppr2Q8VCY8 343 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Olfr1446Q8VFX4 308 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 S1pr5Q91X56 400 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 9330161L09RikQ9D253 136 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Smdt1Q9DB10 107 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Trappc2lQ9JME7 139 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Gm45783A0A1B0GT48 74 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Mn1D3YWE6 1297 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Ankrd65F6YK91 380 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Fam160a2Q3U2I3 975 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Nkain3Q3URJ8 181 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 SnrpcQ62241 159 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Btf3Q64152 204 aaKnown RBP10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Hide1Q75VT8 222 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Q8BTC1 67 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Sfxn4Q925N1 313 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Ccdc198Q9CPZ1 294 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Dda1Q9D9Z5 102 aa10.93□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Piezo1E2JF22 2547 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Olfr284A0A0U1RP76 321 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 OsmP53347 263 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 GferP56213 198 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Dynlrb1P62627 96 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 KhkP97328 298 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Reg2Q08731 173 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Sdr39u1Q5M8N4 308 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Slc36a4Q8CH36 500 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Rps21Q9CQR2 83 aaKnown RBP10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Vmn1r46Q9EQ45 309 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Mbnl1Q9JKP5 341 aaKnown RBP10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Ctxnd1A0A1B0GST9 59 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Gm20830J3KML6 227 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Gm21244J3QK38 227 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Lgals9O08573 353 aaKnown RBP10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Foxh1O88621 401 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Bmp5P49003 452 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Zfp874aQ8BX23 447 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 RnasekQ8K3C0 98 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Tmem54Q9D7S1 219 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Med12A2AGH6 2190 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Lrrk1Q3UHC2 2014 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 PoleQ9WVF7 2283 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 H2-M5A7VMS3 348 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Olfr466E9Q2B9 308 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Twist1P26687 206 aa10.92□□□□□ -0.66
Clcn3-201ENSMUST00000004430 Hist1h1eP43274 219 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms