RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	HOXB5	P09067	269 aa		11.2	□□□□□ -0.62
PHGDH-231	ENST00000641939	IGLC1	P0CG04	106 aa		11.2	□□□□□ -0.62
PHGDH-231	ENST00000641939	OR10J1	P30954	320 aa		11.2	□□□□□ -0.62
PHGDH-231	ENST00000641939	ST8SIA2	Q92186	375 aa		11.2	□□□□□ -0.62
PHGDH-231	ENST00000641939	CITED4	Q96RK1	184 aa		11.2	□□□□□ -0.62
PHGDH-231	ENST00000641939	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.2	□□□□□ -0.62
PHGDH-231	ENST00000641939	IGKV3-7	A0A075B6H7	116 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	MED6	O75586	246 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	IFNA4	P05014	189 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	OR4E1	P0C645	316 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	NPPC	P23582	126 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	DHRS2	Q13268	280 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	ODF3L2	Q3SX64	289 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	GGNBP1	Q5YKI7	109 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	FAM90A2P	Q658T7	463 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	TCF24	Q7RTU0	167 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	NPIPB3	Q92617	1050 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	ACY3	Q96HD9	319 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	METTL26	Q96S19	204 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	FAM110A	Q9BQ89	295 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	GGTLC1	Q9BX51	225 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	TMEM231	Q9H6L2	316 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	RETN	Q9HD89	108 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	CSMD3	Q7Z407	3707 aa		11.19	□□□□□ -0.62
PHGDH-231	ENST00000641939	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	C3orf84	H3BNL1	204 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	IAPP	P10997	89 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	CRYBB3	P26998	211 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	TFPI2	P48307	235 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	YPEL3	P61236	119 aa	Predicted RBP	11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	PAFAH1B2	P68402	229 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	CNPY1	Q3B7I2	92 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	LYG2	Q86SG7	212 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	LILRB2	Q8N423	598 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	COQ8A	Q8NI60	647 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	MUC7	Q8TAX7	377 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939		Q8WTZ3	238 aa		11.18	□□□□□ -0.62
PHGDH-231	ENST00000641939	IGHV3-66	A0A0C4DH42	116 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939		A0A1W2PS18	150 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	PLA2G10	O15496	165 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	LYRM1	O43325	122 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	ADAP1	O75689	374 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	DFFB	O76075	338 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	ANXA7	P20073	488 aa	Known RBP	11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	GPX4	P36969	197 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	CMC4	P56277	68 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	RAB11A	P62491	216 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	C4orf46	Q504U0	113 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	LINC00299	Q6ZSB3	139 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	GBGT1	Q8N5D6	347 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	NARS2	Q96I59	477 aa	Known RBP	11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	CIB3	Q96Q77	187 aa	Predicted RBP	11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	CCDC32	Q9BV29	185 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	MAGT1	Q9H0U3	335 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	EDA2R	Q9HAV5	297 aa		11.17	□□□□□ -0.62
PHGDH-231	ENST00000641939	SYNGR2	O43760	224 aa		11.16	□□□□□ -0.62
PHGDH-231	ENST00000641939	RPL11	P62913	178 aa	Known RBP	11.16	□□□□□ -0.62
PHGDH-231	ENST00000641939	SLC35E1	Q96K37	410 aa		11.16	□□□□□ -0.62
PHGDH-231	ENST00000641939	MS4A6A	Q9H2W1	248 aa		11.16	□□□□□ -0.62
PHGDH-231	ENST00000641939	DNASE2	O00115	360 aa	Predicted RBP	11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	TOMM40	O96008	361 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	IFNA21	P01568	189 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	IL4	P05112	153 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	RD3L	P0DJH9	198 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	RPP30	P78346	268 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	GAMT	Q14353	236 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	WFDC3	Q8IUB2	231 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	GRAMD2B	Q96HH9	432 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	C20orf85	Q9H1P6	137 aa		11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	PAIP2B	Q9ULR5	123 aa	Known RBP	11.15	□□□□□ -0.62
PHGDH-231	ENST00000641939	TRAV2	A0A0B4J234	112 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939		A6NHS1	94 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	MPTX1	A8MV57	137 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	WRB	O00258	174 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	P2RY1	P47900	373 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	APOC4	P55056	127 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	APRG1	Q8IVJ8	170 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	S100Z	Q8WXG8	99 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939		U3KQE9	123 aa		11.14	□□□□□ -0.63
PHGDH-231	ENST00000641939	AGRN	O00468	2067 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	KIR2DL5B	A0A0G2JN68	375 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	KIR2DL5B	A0A0G2JPC4	375 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	ZFP92	A6NM28	416 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	TCRB	P04435	133 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	PSG1	P11464	419 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	LYL1	P12980	280 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	ID3	Q02535	119 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	USF2	Q15853	346 aa	Predicted RBP	11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	KIR2DL5A	Q8N109	375 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	OR4D5	Q8NGN0	318 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	KIR2DL5B	Q8NHK3	375 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	MITD1	Q8WV92	249 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	MAP6D1	Q9H9H5	199 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	RABAC1	Q9UI14	185 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	STARD9	Q9P2P6	4700 aa		11.13	□□□□□ -0.63
PHGDH-231	ENST00000641939	IGKV1D-37	A0A075B6S9	117 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	UBE2C	O00762	179 aa		11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	RPL35A	P18077	110 aa	Known RBP	11.12	□□□□□ -0.63
PHGDH-231	ENST00000641939	NKX2-1	P43699	371 aa	Predicted RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms