RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	NDUFAF3	Q9BU61	184 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	RPH3AL	Q9UNE2	315 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	COL6A6	A6NMZ7	2263 aa		13.53	□□□□□ -0.24
PHGDH-223	ENST00000641597	ISLR	O14498	428 aa		13.52	□□□□□ -0.24
PHGDH-223	ENST00000641597	USF1	P22415	310 aa	Predicted RBP	13.52	□□□□□ -0.24
PHGDH-223	ENST00000641597	LY6H	O94772	140 aa		13.52	□□□□□ -0.25
PHGDH-223	ENST00000641597	TAS2R45	P59539	299 aa		13.52	□□□□□ -0.25
PHGDH-223	ENST00000641597	C10orf113	Q5VZT2	155 aa		13.52	□□□□□ -0.25
PHGDH-223	ENST00000641597		Q71RC1	249 aa	Predicted RBP	13.52	□□□□□ -0.25
PHGDH-223	ENST00000641597	WASHC3	Q9Y3C0	194 aa		13.52	□□□□□ -0.25
PHGDH-223	ENST00000641597	COL12A1	Q99715	3063 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	CORT	O00230	105 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	FSTL3	O95633	263 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	GRN	P28799	593 aa	Known RBP	13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	PPOX	P50336	477 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	ZNF841	Q6ZN19	808 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	AKAP6	Q13023	2319 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	IGHV1-8	P0DP01	117 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	CX3CL1	P78423	397 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	TMEM136	Q6ZRR5	245 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	LINC00305	Q7Z4B0	112 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	PAXX	Q9BUH6	204 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	CACNA1B	Q00975	2339 aa		13.51	□□□□□ -0.25
PHGDH-223	ENST00000641597	SPTBN1	Q01082	2364 aa	Known RBP	13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597		A0A1W2PRE2	83 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	OR1B1	Q8NGR6	318 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	VN1R17P	Q8TDU5	208 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	LY96	Q9Y6Y9	160 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	TNXA	Q16473	311 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	TMEM155	Q4W5P6	130 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	ZNF329	Q86UD4	541 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	PDPN	Q86YL7	162 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	LINC01560	Q8TB33	94 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	CACNG8	Q8WXS5	425 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	FXYD5	Q96DB9	178 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	NOL4L	Q96MY1	436 aa	Predicted RBP	13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	SNHG12	Q9BXW3	62 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	WNK2	Q9Y3S1	2297 aa		13.5	□□□□□ -0.25
PHGDH-223	ENST00000641597	TCRBV4S1A1T	A0A5B7	111 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	IGLC7	A0M8Q6	106 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	COX7A1	P24310	79 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	SAMD10	Q9BYL1	202 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	FAM87A	P0C7U9	286 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	SRI	P30626	198 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	SLA	Q13239	276 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	TPTE2P1	Q5T6R2	138 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	FAM19A2	Q8N3H0	131 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	TMEM186	Q96B77	213 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	JKAMP	Q9P055	326 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	FBXL7	Q9UJT9	491 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	RALY	Q9UKM9	306 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	PAM16	Q9Y3D7	125 aa		13.49	□□□□□ -0.25
PHGDH-223	ENST00000641597	BMPR1B	O00238	502 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	TOX4	O94842	621 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	GDF5OS	Q5U4N7	250 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	OSTC	Q9NRP0	149 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	ZFHX3	Q15911	3703 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	PMCH	P20382	165 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	ASCL2	Q99929	193 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	CHODL	Q9H9P2	273 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	CDC42EP3	Q9UKI2	254 aa		13.48	□□□□□ -0.25
PHGDH-223	ENST00000641597	IGHV1-69-2	A0A0G2JMI3	117 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	CD24	P25063	80 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	COMP	P49747	757 aa	Predicted RBP	13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	TPPP2	P59282	170 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	TMEM30B	Q3MIR4	351 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	PNKD	Q8N490	385 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	GNB1L	Q9BYB4	327 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	TNFRSF19	Q9NS68	423 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	SPTBN4	Q9H254	2564 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	CELSR1	Q9NYQ6	3014 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597		A0A1W2PN81	502 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	VWC2L	B2RUY7	222 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	GPR6	P46095	362 aa	Predicted RBP	13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	KRTDAP	P60985	99 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	C1orf194	Q5T5A4	169 aa		13.47	□□□□□ -0.25
PHGDH-223	ENST00000641597	SMIM27	A0A1W2PRY6	76 aa		13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	PEX7	O00628	323 aa		13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	VSTM2A	Q8TAG5	236 aa		13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	MRPL32	Q9BYC8	188 aa	Known RBP	13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	TMEM133	Q9H2Q1	129 aa		13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	ARL2-SNX15	V9GYD0	113 aa		13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	CHD8	Q9HCK8	2581 aa		13.46	□□□□□ -0.25
PHGDH-223	ENST00000641597	FOXC1	Q12948	553 aa		13.46	□□□□□ -0.26
PHGDH-223	ENST00000641597	LDLRAD2	Q5SZI1	272 aa		13.46	□□□□□ -0.26
PHGDH-223	ENST00000641597	NUDT10	Q8NFP7	164 aa		13.46	□□□□□ -0.26
PHGDH-223	ENST00000641597	NUDT11	Q96G61	164 aa		13.46	□□□□□ -0.26
PHGDH-223	ENST00000641597	C19orf24	Q9BVV8	132 aa		13.46	□□□□□ -0.26
PHGDH-223	ENST00000641597	SSUH2	Q9Y2M2	353 aa		13.46	□□□□□ -0.26
PHGDH-223	ENST00000641597	MAP1A	P78559	2803 aa	Predicted RBP	13.46	□□□□□ -0.26
PHGDH-223	ENST00000641597	IGHV2-26	A0A0B4J1V2	119 aa		13.45	□□□□□ -0.26
PHGDH-223	ENST00000641597	ZNF253	O75346	499 aa		13.45	□□□□□ -0.26
PHGDH-223	ENST00000641597	VMA21	Q3ZAQ7	101 aa		13.45	□□□□□ -0.26
PHGDH-223	ENST00000641597	KIR3DL3	Q8N743	410 aa		13.45	□□□□□ -0.26
PHGDH-223	ENST00000641597	FBXL15	Q9H469	300 aa		13.45	□□□□□ -0.26
PHGDH-223	ENST00000641597	TBL2	Q9Y4P3	447 aa	Known RBP	13.45	□□□□□ -0.26

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