RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 EWSR1Q01844 656 aaKnown RBP eCLIP7.62□□□□□ -1.19
PHGDH-222ENST00000641587 SLC25A24Q6NUK1 477 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 ACOT7LQ6ZUV0 252 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 LILRB2Q8N423 598 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 TMEM252Q8N6L7 170 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 SMIM3Q9BZL3 60 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 HSPB11Q9Y547 144 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 HERC2O95714 4834 aa7.62□□□□□ -1.19
PHGDH-222ENST00000641587 RNF222A6NCQ9 220 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 NPIPB5A8MRT5 1133 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 SCAF4O95104 1147 aaKnown RBP7.61□□□□□ -1.19
PHGDH-222ENST00000641587 PRH1P02810 166 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 CTRB1P17538 263 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 SULT1A1P50225 295 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 HBG1P69891 147 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 HBG2P69892 147 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 NHLH2Q02577 135 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 BAXQ07812 192 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 SLC38A11Q08AI6 406 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 OR2F1Q13607 317 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 CLINT1Q14677 625 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 AKIRIN2Q53H80 203 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 C2orf83Q53S99 150 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 CTRB2Q6GPI1 263 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 TMEM14EPQ6UXP3 125 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 TTC9CQ8N5M4 171 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 ZNF114Q8NC26 417 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 OR10P1Q8NGE3 313 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 OR1P1Q8NH06 330 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 PINX1Q96BK5 328 aaKnown RBP7.61□□□□□ -1.19
PHGDH-222ENST00000641587 TMEM68Q96MH6 324 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 AQP10Q96PS8 301 aa7.61□□□□□ -1.19
PHGDH-222ENST00000641587 F11RQ9Y624 299 aaKnown RBP7.61□□□□□ -1.19
PHGDH-222ENST00000641587 IGHV3-21A0A0B4J1V1 117 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 A0A0D9SG52 128 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 SMCO3A2RU48 225 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 IZUMO1RA6ND01 250 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 CORTO00230 105 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 CXCL2P19875 107 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 OPRK1P41145 380 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 ATP5IP56385 69 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-222ENST00000641587 BSXQ3C1V8 233 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 TMUB2Q71RG4 321 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 C9orf62Q8N4C0 152 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 OR1L6Q8NGR2 347 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 TMEM170AQ8WVE7 144 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 BSCL2Q96G97 398 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-222ENST00000641587 ELOVL1Q9BW60 279 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 ARL6Q9H0F7 186 aa7.6□□□□□ -1.19
PHGDH-222ENST00000641587 RPS10-NUDT3A0A1W2PQS6 291 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 KANTRA0A1W2PQU2 76 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 ANKRD34BA5PLL1 514 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 OR2J3O76001 311 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 TRGV3P03979 118 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 CRYGCP07315 174 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 HIST1H1BP16401 226 aaKnown RBP7.59□□□□□ -1.19
PHGDH-222ENST00000641587 C4BPBP20851 252 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 MFAP2P55001 183 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 AKR1C1Q04828 323 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 ZNF345Q14585 488 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 IL34Q6ZMJ4 242 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 SLC16A13Q7RTY0 426 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 KCNRGQ8N5I3 272 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 OR5C1Q8NGR4 320 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 RNASEH2CQ8TDP1 164 aaKnown RBP7.59□□□□□ -1.19
PHGDH-222ENST00000641587 SLC35E1Q96K37 410 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 ARPC5LQ9BPX5 153 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 TUBA4BQ9H853 241 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 THYN1Q9P016 225 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 FBXL17Q9UF56 701 aa7.59□□□□□ -1.19
PHGDH-222ENST00000641587 UBE2L5PA0A1B0GUS4 154 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 BCL2L11O43521 198 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 DFFBO76075 338 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 MT-CO2P00403 227 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 TRBV12-3P01733 135 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 S100A11P31949 105 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 SYNJ2BPP57105 145 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 DLK1P80370 383 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 RHOGP84095 191 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 ARL16Q0P5N6 197 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 EXOSC2Q13868 293 aaKnown RBP7.58□□□□□ -1.2
PHGDH-222ENST00000641587 LGALSLQ3ZCW2 172 aaPredicted RBP7.58□□□□□ -1.2
PHGDH-222ENST00000641587 ETFRF1Q6IPR1 90 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 OR9G4Q8NGQ1 327 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 ACY3Q96HD9 319 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 ATP5SQ99766 215 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 TMEM147Q9BVK8 224 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 WFDC10AQ9H1F0 79 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 UQCC1Q9NVA1 299 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 FBXL7Q9UJT9 491 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
PHGDH-222ENST00000641587 IGLV11-55A0A075B6I3 123 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 BORCS7-ASMTA0A0B4J1R7 106 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 PMS2P5A8MQ11 134 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 BRI3O95415 125 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 IFNA5P01569 189 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 IGHV3-48P01763 117 aa7.57□□□□□ -1.2
PHGDH-222ENST00000641587 KLF5Q13887 457 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-222ENST00000641587 ATP6V1FQ16864 119 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms