RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 FAM24BQ8N5W8 94 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 C19orf24Q9BVV8 132 aa13.07□□□□□ -0.32
PHGDH-216ENST00000641375 FBN2P35556 2912 aa13.06□□□□□ -0.32
PHGDH-216ENST00000641375 CRYGCP07315 174 aa13.06□□□□□ -0.32
PHGDH-216ENST00000641375 LINC00869P0C866 280 aa13.06□□□□□ -0.32
PHGDH-216ENST00000641375 DEFA4P12838 97 aa13.06□□□□□ -0.32
PHGDH-216ENST00000641375 MFAP2P55001 183 aa13.06□□□□□ -0.32
PHGDH-216ENST00000641375 NUTF2P61970 127 aaKnown RBP13.06□□□□□ -0.32
PHGDH-216ENST00000641375 TRAV40A0A0B4J280 105 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 J3QKU1 62 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 PLA2G2AP14555 144 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 THAP8Q8NA92 274 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 YPEL4Q96NS1 127 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 CENPEQ02224 2701 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-216ENST00000641375 MT-CO2P00403 227 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 STAG3L2P0CL84 134 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 STAG3L3P0CL85 134 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 CX3CL1P78423 397 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 CYP2G1PQ6ZSU1 146 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 LRRC75A-AS1Q8N1F1 130 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 TMEM116Q8NCL8 245 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 ARPC1AQ92747 370 aa13.05□□□□□ -0.32
PHGDH-216ENST00000641375 CXorf1O96002 111 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 RND2P52198 227 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 SELENOTP62341 195 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 FAM120AOSQ5T036 256 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 SLC25A33Q9BSK2 321 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 WNT10AQ9GZT5 417 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 HIF1ANQ9NWT6 349 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 TCRBV4S1A1TA0A5B7 111 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 M0R036 132 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-216ENST00000641375 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 CYB561D1Q8N8Q1 229 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 Q8N9W7 124 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 OR10D4PQ8NGN7 298 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 OR5R1Q8NH85 324 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 SEPSECSQ9HD40 501 aaKnown RBP13.04□□□□□ -0.32
PHGDH-216ENST00000641375 DOK5Q9P104 306 aa13.04□□□□□ -0.32
PHGDH-216ENST00000641375 HLA-DRB1P01911 266 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 KRTAP10-9P60411 292 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 RASL11BQ9BPW5 248 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 SVEP1Q4LDE5 3571 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-216ENST00000641375 NPIPB5A8MRT5 1133 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 NDUFA6P56556 154 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 FAM78BQ5VT40 261 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 RUSC1-AS1Q66K80 236 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 SPNS3Q6ZMD2 512 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 C19orf35Q6ZS72 473 aa13.03□□□□□ -0.32
PHGDH-216ENST00000641375 FAM103A1Q9BTL3 118 aaKnown RBP13.03□□□□□ -0.32
PHGDH-216ENST00000641375 CSMD2Q7Z408 3487 aa13.02□□□□□ -0.32
PHGDH-216ENST00000641375 A0A096LNT2 108 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 IGHV3-48P01763 117 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 ARL14EPLP0DKL9 152 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 GATA2P23769 480 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-216ENST00000641375 CEBPGP53567 150 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 GATAD1Q8WUU5 269 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 NOL4LQ96MY1 436 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-216ENST00000641375 RNF2Q99496 336 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 MEGF9Q9H1U4 602 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 FUT9Q9Y231 359 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.02□□□□□ -0.339e-8■□□□□ 11
PHGDH-216ENST00000641375 PTPN13Q12923 2485 aa13.02□□□□□ -0.33
PHGDH-216ENST00000641375 IGKV1D-37A0A075B6S9 117 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 IGHV3OR16-10A0A075B7F0 116 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 BRD3OSQ6XYD6 125 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 TRGV9Q99603 122 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 MRPL36Q9P0J6 103 aaKnown RBP13.01□□□□□ -0.33
PHGDH-216ENST00000641375 I3L2K1 104 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 OR5G3P0C626 314 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 IGHV4-38-2P0DP08 117 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 LOXL1Q08397 574 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-216ENST00000641375 TTC9CQ8N5M4 171 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 OR1L4Q8NGR5 311 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 TNFRSF19Q9NS68 423 aa13.01□□□□□ -0.33
PHGDH-216ENST00000641375 IGHV7-81A0A0B4J1V7 117 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 TAS2R45P59539 299 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 HIST3H2BBQ8N257 126 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 TXNDC17Q9BRA2 123 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 NIPSNAP3BQ9BS92 247 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 NDUFAF3Q9BU61 184 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 MRPL32Q9BYC8 188 aaKnown RBP13□□□□□ -0.33
PHGDH-216ENST00000641375 TENM4Q6N022 2769 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 TMEM250H0YL14 139 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 PPP1R2P9O14990 202 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 PAGE4O60829 102 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 RPS10P46783 165 aaKnown RBP13□□□□□ -0.33
PHGDH-216ENST00000641375 BPIFB3P59826 476 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 NDPQ00604 133 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 ZNF90Q03938 601 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 OR4X1Q8NH49 305 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 DNAJC4Q9NNZ3 241 aa13□□□□□ -0.33
PHGDH-216ENST00000641375 TECRQ9NZ01 308 aaKnown RBP13□□□□□ -0.33
PHGDH-216ENST00000641375 A0A0U1RQK1 487 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms